RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 FTOQ9C0B1 505 aaKnown RBP eCLIP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 ARL4DP49703 201 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 NUGGCQ68CJ6 796 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 ZNF513Q8N8E2 541 aaPredicted RBP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 NLRP4Q96MN2 994 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 NDFIP2Q9NV92 336 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 PAIP2BQ9ULR5 123 aaKnown RBP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 SCAF11Q99590 1463 aaKnown RBP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 NCOA1Q15788 1441 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 CCDC195A0A1B0GUA6 201 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 CXCR5P32302 372 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 GUCY1A3Q02108 690 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 CUL1Q13616 776 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 ACCSLQ4AC99 568 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 DDIASQ8IXT1 998 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 CMTR1Q8N1G2 835 aaKnown RBP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 FAM227BQ96M60 508 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 GADD45BO75293 160 aaPredicted RBP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 NR1D1P20393 614 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 ANKRD49Q8WVL7 239 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 GINS4Q9BRT9 223 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 TUBGCP2Q9BSJ2 902 aa14.82□□□□□ -0.04
PDE4D-203ENST00000340635 RPF1Q9H9Y2 349 aaKnown RBP14.82□□□□□ -0.04
PDE4D-203ENST00000340635 KIF1CO43896 1103 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 ASIC4Q96FT7 647 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 AGBL1Q96MI9 1066 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 NDE1Q9NXR1 346 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 MAP4P27816 1152 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 ST13P50502 369 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 PCDHA5Q9Y5H7 936 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 COPB1P53618 953 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 SCARA5Q6ZMJ2 495 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 THOC1Q96FV9 657 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 OSTNP61366 133 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 MEI1Q5TIA1 1274 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 SPATA1Q5VX52 437 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 NOVA2Q9UNW9 492 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 FAM32AQ9Y421 112 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 ASXL1Q8IXJ9 1541 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 MAGEA9P43362 315 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 GTF2IP78347 998 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 TBC1D1Q86TI0 1168 aaPredicted RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 MFN1Q8IWA4 741 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 PLEKHA8Q96JA3 519 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 EML4Q9HC35 981 aaKnown RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 ICA1Q05084 483 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 LRRC31Q6UY01 552 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 TUBGCP3Q96CW5 907 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 CHUKO15111 745 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 TRIP4Q15650 581 aaPredicted RBP14.81□□□□□ -0.04
PDE4D-203ENST00000340635 YIPF3Q9GZM5 350 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 TMEM206Q9H813 350 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 STOML1Q9UBI4 398 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 RNF14Q9UBS8 474 aa14.81□□□□□ -0.04
PDE4D-203ENST00000340635 SEC24DO94855 1032 aaPredicted RBP14.8□□□□□ -0.04
PDE4D-203ENST00000340635 RUNX1T1Q06455 604 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 GPKOWQ92917 476 aaPredicted RBP eCLIP14.8□□□□□ -0.04
PDE4D-203ENST00000340635 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
PDE4D-203ENST00000340635 AOX1Q06278 1338 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 E7EWF7 191 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 MMEP08473 750 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 EPM2AIP1Q7L775 607 aaPredicted RBP14.8□□□□□ -0.04
PDE4D-203ENST00000340635 ST13P5Q8NFI4 369 aaPredicted RBP14.8□□□□□ -0.04
PDE4D-203ENST00000340635 JAK2O60674 1132 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 LRRC74AQ0VAA2 488 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 CUEDC2Q9H467 287 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 LRRC53A6NM62 1247 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 KRT38O76015 456 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 GFPT2O94808 682 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 SERPIND1P05546 499 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 TSC22D1Q15714 1073 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 SLC35F6Q8N357 371 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 SYMPKQ92797 1274 aaKnown RBP14.8□□□□□ -0.04
PDE4D-203ENST00000340635 KLHL31Q9H511 634 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 PIDD1Q9HB75 910 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 CACNA2D2Q9NY47 1150 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 KLRF2D3W0D1 207 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 TBC1D4O60343 1298 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 SURF1Q15526 300 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 METTL22Q9BUU2 404 aaPredicted RBP14.8□□□□□ -0.04
PDE4D-203ENST00000340635 NDEL1Q9GZM8 345 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
PDE4D-203ENST00000340635 CCNYL1Q8N7R7 359 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 FANCLQ9NW38 375 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 AURKCQ9UQB9 309 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 TSC22D4Q9Y3Q8 395 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 DEFA1P59665 94 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 DEFA3P59666 94 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.79□□□□□ -0.04
PDE4D-203ENST00000340635 LRRC59Q96AG4 307 aaKnown RBP14.79□□□□□ -0.04
PDE4D-203ENST00000340635 MYCP01106 439 aaPredicted RBP14.79□□□□□ -0.04
PDE4D-203ENST00000340635 CENPPQ6IPU0 288 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 ARHGEF25Q86VW2 580 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 AFG1LQ8WV93 481 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 VPS11Q9H270 941 aa14.79□□□□□ -0.04
PDE4D-203ENST00000340635 PCIF1Q9H4Z3 704 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms