RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TRANK1O15050 2925 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 COL4A6Q14031 1691 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 TBX3O15119 743 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 MAGEB2O15479 319 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 LARGE1O95461 756 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 TDP2O95551 362 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 FDPSP14324 419 aaKnown RBP15.04■□□□□ -0
SIRPB3P-201ENST00000340424 KLRC1P26715 233 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 RBM25P49756 843 aaKnown RBP15.04■□□□□ -0
SIRPB3P-201ENST00000340424 TAP1Q03518 808 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 LPIN1Q14693 890 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 LETM2Q2VYF4 491 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 POTEHQ6S545 545 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 FTHL17Q9BXU8 183 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 FAM49AQ9H0Q0 323 aaPredicted RBP15.04■□□□□ -0
SIRPB3P-201ENST00000340424 UPF2Q9HAU5 1272 aaKnown RBP15.04■□□□□ -0
SIRPB3P-201ENST00000340424 SH2B1Q9NRF2 756 aaPredicted RBP15.04■□□□□ -0
SIRPB3P-201ENST00000340424 NRBP2Q9NSY0 501 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
SIRPB3P-201ENST00000340424 PCDHB13Q9Y5F0 798 aa15.04■□□□□ -0
SIRPB3P-201ENST00000340424 A0A0C4DFX4 3053 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 PRUNE2Q8WUY3 3088 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 SIP14410 1827 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 ZBTB42B2RXF5 422 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 OATP04181 439 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 GHRP10912 638 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 ATP4AP20648 1035 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 HTRA4P83105 476 aaPredicted RBP15.03■□□□□ -0
SIRPB3P-201ENST00000340424 ODR4Q5SWX8 454 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 B3GNT9Q6UX72 402 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.03■□□□□ -0
SIRPB3P-201ENST00000340424 PIK3AP1Q6ZUJ8 805 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 MIER3Q7Z3K6 550 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 MYOCDQ8IZQ8 938 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 TRAPPC12Q8WVT3 735 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 TOP1MTQ969P6 601 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 UIMC1Q96RL1 719 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 CELF4Q9BZC1 486 aaKnown RBP15.03■□□□□ -0
SIRPB3P-201ENST00000340424 UNC45AQ9H3U1 944 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 KCNMB3Q9NPA1 279 aa15.03■□□□□ -0
SIRPB3P-201ENST00000340424 CHMP2AO43633 222 aa15.02■□□□□ -0
SIRPB3P-201ENST00000340424 DKC1O60832 514 aaKnown RBP eCLIP15.02■□□□□ -0
SIRPB3P-201ENST00000340424 C22orf31O95567 290 aa15.02■□□□□ -0
SIRPB3P-201ENST00000340424 MMP1P03956 469 aa15.02■□□□□ -0
SIRPB3P-201ENST00000340424 POU3F3P20264 500 aaPredicted RBP15.02■□□□□ -0
SIRPB3P-201ENST00000340424 TMOD1P28289 359 aa15.02■□□□□ -0
SIRPB3P-201ENST00000340424 HMGN5P82970 282 aaKnown RBP15.02■□□□□ -0
SIRPB3P-201ENST00000340424 PRKCEQ02156 737 aa15.02■□□□□ -0
SIRPB3P-201ENST00000340424 PPP2R5CQ13362 524 aa15.02■□□□□ -0
SIRPB3P-201ENST00000340424 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 MAP3K13O43283 966 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 GTPBP6O43824 516 aaPredicted RBP15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 SLC37A4O43826 429 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 CCNT1O60563 726 aaKnown RBP15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 PAK2Q13177 524 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 RABEP1Q15276 862 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 SAFBQ15424 915 aaKnown RBP eCLIP15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 XKR3Q5GH77 459 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 SLFN12Q8IYM2 578 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 KIAA0319LQ8IZA0 1049 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 HS6ST3Q8IZP7 471 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 OXER1Q8TDS5 423 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 SAMD11Q96NU1 681 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 TGS1Q96RS0 853 aaKnown RBP15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 YME1L1Q96TA2 773 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 ANP32EQ9BTT0 268 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 GJB4Q9NTQ9 266 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 WDR81Q562E7 1941 aa15.01□□□□□ -0.01
SIRPB3P-201ENST00000340424 LINC01553A4QN01 128 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 ST18O60284 1047 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 ZNF862O60290 1169 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 MARCH6O60337 910 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 JAK2O60674 1132 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 BAG4O95429 457 aaKnown RBP15□□□□□ -0.01
SIRPB3P-201ENST00000340424 IGFBP4P22692 258 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
SIRPB3P-201ENST00000340424 ZBTB10Q96DT7 871 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 PHF12Q96QT6 1004 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 MAP7D2Q96T17 732 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 KIF2CQ99661 725 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 NIFKQ9BYG3 293 aaKnown RBP15□□□□□ -0.01
SIRPB3P-201ENST00000340424 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 PPME1Q9Y570 386 aa15□□□□□ -0.01
SIRPB3P-201ENST00000340424 LCHNA4D1U4 455 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 CD52P31358 61 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 CLCN6P51797 869 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 CRYBB1P53674 252 aaPredicted RBP14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 ERVK-21P61565 698 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 PSMC5P62195 406 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 CDC42EP1Q00587 391 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 TMEM62Q0P6H9 643 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 ST3GAL1Q11201 340 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 NR5A1Q13285 461 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 ADGRE1Q14246 886 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 KRT40Q6A162 431 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 FAM117BQ6P1L5 589 aa14.99□□□□□ -0.01
SIRPB3P-201ENST00000340424 TMCO2Q7Z6W1 182 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms