RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ADAMTS4O75173 837 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 KRT18P05783 430 aaKnown RBP16.44■□□□□ 0.22
CSRP1-201ENST00000340006 NPEPPSP55786 919 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 PLCB4Q15147 1175 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 MTERF2Q49AM1 385 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 PLA2G4FQ68DD2 849 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 SYT2Q8N9I0 419 aaPredicted RBP16.44■□□□□ 0.22
CSRP1-201ENST00000340006 DBR1Q9UK59 544 aaKnown RBP16.44■□□□□ 0.22
CSRP1-201ENST00000340006 DNAH12Q6ZR08 3092 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 TFRCP02786 760 aaKnown RBP16.43■□□□□ 0.22
CSRP1-201ENST00000340006 ASGR1P07306 291 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
CSRP1-201ENST00000340006 PURAQ00577 322 aaKnown RBP16.43■□□□□ 0.22
CSRP1-201ENST00000340006 LRRC41Q15345 812 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 KIAA0753Q2KHM9 967 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 CXCL17Q6UXB2 119 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 ATP8B4Q8TF62 1192 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 ZNF333Q96JL9 665 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 CLSTN2Q9H4D0 955 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 MAGEF1Q9HAY2 307 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 PAK6Q9NQU5 681 aaPredicted RBP16.43■□□□□ 0.22
CSRP1-201ENST00000340006 KBTBD4Q9NVX7 518 aa16.43■□□□□ 0.22
CSRP1-201ENST00000340006 LOXHD1Q8IVV2 1947 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 HBP1O60381 514 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 SLC12A3P55017 1021 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 ZNF445P59923 1031 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 RAD51AP2Q09MP3 1159 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 DYMQ7RTS9 669 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 GPBP1Q86WP2 473 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 KLHDC9Q8NEP7 349 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 MTG1Q9BT17 334 aaPredicted RBP16.42■□□□□ 0.22
CSRP1-201ENST00000340006 KATNAL1Q9BW62 490 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 BLZF1Q9H2G9 400 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 CYP26B1Q9NR63 512 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 LETM1O95202 739 aaPredicted RBP16.42■□□□□ 0.22
CSRP1-201ENST00000340006 STBD1O95210 358 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 RARRES1P49788 294 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 IGBP1P78318 339 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 NKX3-2P78367 333 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 PNOCQ13519 176 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 MFSD10Q14728 455 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 POSTNQ15063 836 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 PADI6Q6TGC4 694 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 ERCC4Q92889 916 aaPredicted RBP16.42■□□□□ 0.22
CSRP1-201ENST00000340006 NIFKQ9BYG3 293 aaKnown RBP16.42■□□□□ 0.22
CSRP1-201ENST00000340006 MCOLN1Q9GZU1 580 aa16.42■□□□□ 0.22
CSRP1-201ENST00000340006 KBTBD13C9JR72 458 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 CASP1P29466 404 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 PSEN2P49810 448 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 RINT1Q6NUQ1 792 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 MAEAQ7L5Y9 396 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 C7orf31Q8N865 590 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 KAT2BQ92831 832 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 MTRQ99707 1265 aa16.41■□□□□ 0.22
CSRP1-201ENST00000340006 MYMKA6NI61 221 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 F2P00734 622 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 INSRRP14616 1297 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 CST5P28325 142 aaPredicted RBP16.4■□□□□ 0.22
CSRP1-201ENST00000340006 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
CSRP1-201ENST00000340006 PPP1R13LQ8WUF5 828 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 DDX12PQ92771 950 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 POLD4Q9HCU8 107 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 NPHP3-ACAD11A0A0J9YXS1 232 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 USO1O60763 962 aaKnown RBP16.4■□□□□ 0.22
CSRP1-201ENST00000340006 SGPL1O95470 568 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 IDEP14735 1019 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 ACLYP53396 1101 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 POLGP54098 1239 aaPredicted RBP16.4■□□□□ 0.22
CSRP1-201ENST00000340006 CUL4BQ13620 913 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 ARSHQ5FYA8 562 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 ZNF484Q5JVG2 852 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 ELOA2Q8IYF1 753 aaPredicted RBP16.4■□□□□ 0.22
CSRP1-201ENST00000340006 TSEN34Q9BSV6 310 aaKnown RBP16.4■□□□□ 0.22
CSRP1-201ENST00000340006 ZHX3Q9H4I2 956 aa16.4■□□□□ 0.22
CSRP1-201ENST00000340006 MOXD2PA6NHM9 499 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 GTPBP6O43824 516 aaPredicted RBP16.39■□□□□ 0.21
CSRP1-201ENST00000340006 SMC2O95347 1197 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 PRR29P0C7W0 189 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 CYP11B2P19099 503 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 ASIC1P78348 528 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 TBC1D8BQ0IIM8 1120 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 PPFIA1Q13136 1202 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 CCSAPQ6IQ19 270 aaPredicted RBP16.39■□□□□ 0.21
CSRP1-201ENST00000340006 LRSAM1Q6UWE0 723 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 C1orf186Q6ZWK4 172 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
CSRP1-201ENST00000340006 SLC7A3Q8WY07 619 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 C7orf25Q9BPX7 421 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 RUSC1Q9BVN2 902 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 SUGCTQ9HAC7 445 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 SETD4Q9NVD3 440 aa16.39■□□□□ 0.21
CSRP1-201ENST00000340006 EVPLQ92817 2033 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 DGAT1O75907 488 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 CABYRO75952 493 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 MYL1P05976 194 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 GJB1P08034 283 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms