RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 FOSP01100 380 aaPredicted RBP13.12□□□□□ -0.31
TREM2-201ENST00000338469 MMP1P03956 469 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 CYP3A4P08684 503 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
TREM2-201ENST00000338469 SYT1P21579 422 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 CD52P31358 61 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 STAT5BP51692 787 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
TREM2-201ENST00000338469 GALNT17Q6IS24 598 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 TAF2Q6P1X5 1199 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 PLPPR4Q7Z2D5 763 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 CCDC60Q8IWA6 550 aaPredicted RBP13.12□□□□□ -0.31
TREM2-201ENST00000338469 CRIPAKQ8N1N5 446 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 DAGLBQ8NCG7 672 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.31
TREM2-201ENST00000338469 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 TTC3P53804 2025 aa13.12□□□□□ -0.31
TREM2-201ENST00000338469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
TREM2-201ENST00000338469 STX6O43752 255 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 KRT2P35908 639 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 MRPS6P82932 125 aaKnown RBP13.11□□□□□ -0.31
TREM2-201ENST00000338469 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
TREM2-201ENST00000338469 MTHFD1LQ6UB35 978 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 BLIDQ8IZY5 108 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 GJA10Q969M2 543 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 LENG9Q96B70 501 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 CD320Q9NPF0 282 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 LMCD1Q9NZU5 365 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
TREM2-201ENST00000338469 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 GATMP50440 423 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 TMEM266Q2M3C6 531 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 TMEM192Q8IY95 271 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
TREM2-201ENST00000338469 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
TREM2-201ENST00000338469 APBB2Q92870 758 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 HLA-CQ95604 372 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 ZNF689Q96CS4 500 aaPredicted RBP13.1□□□□□ -0.31
TREM2-201ENST00000338469 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 PCDHA2Q9Y5H9 948 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 EVPLQ92817 2033 aa13.1□□□□□ -0.31
TREM2-201ENST00000338469 H3BNC9 293 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 MGEA5O60502 916 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 KLRC1P26715 233 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 ZNF76P36508 570 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 GPM6BQ13491 265 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 NPY5RQ15761 445 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 MCTP2Q6DN12 878 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 SWSAP1Q6NVH7 229 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 TSHZ1Q6ZSZ6 1077 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 NLRC5Q86WI3 1866 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 KIAA0319LQ8IZA0 1049 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.09□□□□□ -0.31
TREM2-201ENST00000338469 TMEM40Q8WWA1 233 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 FAM122AQ96E09 287 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
TREM2-201ENST00000338469 AZI2Q9H6S1 392 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 PADI3Q9ULW8 664 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 COG5Q9UP83 839 aa13.09□□□□□ -0.31
TREM2-201ENST00000338469 SMIM35A0A1B0GVV1 85 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 BTBD18B2RXH4 712 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
TREM2-201ENST00000338469 GRM6O15303 877 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 CIITAP33076 1130 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 DDIT3P35638 169 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 CAMK1Q14012 370 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 TRMT1LQ7Z2T5 733 aaKnown RBP13.08□□□□□ -0.32
TREM2-201ENST00000338469 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 MRPL38Q96DV4 380 aaKnown RBP13.08□□□□□ -0.32
TREM2-201ENST00000338469 CELF4Q9BZC1 486 aaKnown RBP13.08□□□□□ -0.32
TREM2-201ENST00000338469 FOXP1Q9H334 677 aaPredicted RBP13.08□□□□□ -0.32
TREM2-201ENST00000338469 UBE2ZQ9H832 354 aaPredicted RBP13.08□□□□□ -0.32
TREM2-201ENST00000338469 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 TRPV2Q9Y5S1 764 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 IGSF9BQ9UPX0 1349 aa13.08□□□□□ -0.32
TREM2-201ENST00000338469 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 M0R2N6 131 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 ZNF862O60290 1169 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 DGKIO75912 1065 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 ZSCAN22P10073 491 aaPredicted RBP13.07□□□□□ -0.32
TREM2-201ENST00000338469 DNAJB1P25685 340 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
TREM2-201ENST00000338469 NUCB2P80303 420 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 NR5A1Q13285 461 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 PKP1Q13835 747 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 PRR16Q569H4 304 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 TCEAL5Q5H9L2 206 aa13.07□□□□□ -0.32
TREM2-201ENST00000338469 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms