RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 CDCA3Q99618 268 aaPredicted RBP13.12□□□□□ -0.31
CSMD2-202ENST00000338325 C1orf112Q9NSG2 853 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 COL1A2P08123 1366 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 DENND3A2RUS2 1198 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 PER2O15055 1255 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 FGF18O76093 207 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 ATG7O95352 703 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 ARP10275 920 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 KLRC1P26715 233 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 SIGLEC14Q08ET2 396 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 ITGB3BPQ13352 177 aaPredicted RBP13.11□□□□□ -0.31
CSMD2-202ENST00000338325 DUSP6Q16828 381 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 PDE12Q6L8Q7 609 aaKnown RBP13.11□□□□□ -0.31
CSMD2-202ENST00000338325 THNSL1Q8IYQ7 743 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 COLGALT1Q8NBJ5 622 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 VN1R2Q8NFZ6 395 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 SUSD6Q92537 303 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 ADAM2Q99965 735 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 AGO4Q9HCK5 861 aaKnown RBP13.11□□□□□ -0.31
CSMD2-202ENST00000338325 RGS18Q9NS28 235 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 GINS2Q9Y248 185 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 NOC2LQ9Y3T9 749 aaKnown RBP13.11□□□□□ -0.31
CSMD2-202ENST00000338325 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
CSMD2-202ENST00000338325 IGKV6D-21A0A0A0MT36 114 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 FSCN2O14926 492 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 HBP1O60381 514 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 SRGAP2BP0DMP2 458 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 ERVFC1P60507 584 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
CSMD2-202ENST00000338325 TCF15Q12870 199 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
CSMD2-202ENST00000338325 CEP55Q53EZ4 464 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 FAM102BQ5T8I3 360 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 PPP1R18Q6NYC8 613 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 SLC24A5Q71RS6 500 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 MICU3Q86XE3 530 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 TMEM40Q8WWA1 233 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 PGBD1Q96JS3 809 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 CDHR5Q9HBB8 845 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 RIC8AQ9NPQ8 531 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 CNTNAP5Q8WYK1 1306 aa13.1□□□□□ -0.31
CSMD2-202ENST00000338325 C9IYK1 514 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 BACH1O14867 736 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 GPR182O15218 404 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 FOSP01100 380 aaPredicted RBP13.09□□□□□ -0.31
CSMD2-202ENST00000338325 LAG3P18627 525 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 NAPAP54920 295 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 KIAA0319LQ8IZA0 1049 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 ATP6V0A4Q9HBG4 840 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 TYW1Q9NV66 732 aaKnown RBP13.09□□□□□ -0.31
CSMD2-202ENST00000338325 TMEM260Q9NX78 707 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 ST3GAL5Q9UNP4 418 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 LZTS1Q9Y250 596 aa13.09□□□□□ -0.31
CSMD2-202ENST00000338325 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.31
CSMD2-202ENST00000338325 MEIS1O00470 390 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 SLC27A2O14975 620 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ST18O60284 1047 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 CCNE2O96020 404 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 SREBF1P36956 1147 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ADCY7P51828 1080 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 PTPN21Q16825 1174 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ZNF484Q5JVG2 852 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 PLPP4Q5VZY2 271 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 TMEM184AQ6ZMB5 413 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 SGMS1Q86VZ5 419 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 FAM228AQ86W67 206 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 CCDC60Q8IWA6 550 aaPredicted RBP13.08□□□□□ -0.31
CSMD2-202ENST00000338325 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ASIC4Q96FT7 647 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 LRRC2Q9BYS8 371 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.31
CSMD2-202ENST00000338325 CWH43Q9H720 699 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ZNF302Q9NR11 478 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 TMEM161AQ9NX61 479 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 ZDBF2Q9HCK1 2354 aa13.08□□□□□ -0.31
CSMD2-202ENST00000338325 USP34Q70CQ2 3546 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 ZBTB42B2RXF5 422 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 FGFR1P11362 822 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 ZNF76P36508 570 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 TECP42680 631 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 PLXNA3P51805 1871 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 CRYBB1P53674 252 aaPredicted RBP13.08□□□□□ -0.32
CSMD2-202ENST00000338325 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
CSMD2-202ENST00000338325 APOBRQ0VD83 1088 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 AP3B2Q13367 1082 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 KCNC3Q14003 757 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 ANKRD54Q6NXT1 300 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms