RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GPRC5DQ9NZD1 345 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 RNF181Q9P0P0 153 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 ZMYND10O75800 440 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 CCNE2O96020 404 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 RNASE9P60153 205 aaKnown RBP13.84□□□□□ -0.19
LIMK1-201ENST00000336180 MAP3K9P80192 1104 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 SALL4Q9UJQ4 1053 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 CTAGE9A4FU28 777 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 K7ENM7 598 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 TGFB1I1O43294 461 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 TLR2O60603 784 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 TADA3O75528 432 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 HSD17B4P51659 736 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 KIF11P52732 1056 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 WDR78Q5VTH9 848 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 BAP1Q92560 729 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 PACSIN1Q9BY11 444 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 ARMCX3Q9UH62 379 aaPredicted RBP13.83□□□□□ -0.19
LIMK1-201ENST00000336180 FHOD1Q9Y613 1164 aa13.83□□□□□ -0.19
LIMK1-201ENST00000336180 BACH1O14867 736 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 DHX15O43143 795 aaKnown RBP13.83□□□□□ -0.2
LIMK1-201ENST00000336180 IPO7O95373 1038 aaKnown RBP13.83□□□□□ -0.2
LIMK1-201ENST00000336180 MATR3P43243 847 aaKnown RBP eCLIP13.83□□□□□ -0.2
LIMK1-201ENST00000336180 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
LIMK1-201ENST00000336180 TRIM59Q8IWR1 403 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 DAW1Q8N136 415 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 POLR3CQ9BUI4 534 aaPredicted RBP13.83□□□□□ -0.2
LIMK1-201ENST00000336180 PARVGQ9HBI0 331 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 AGO4Q9HCK5 861 aaKnown RBP13.83□□□□□ -0.2
LIMK1-201ENST00000336180 ZNF446Q9NWS9 450 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 CAPN6Q9Y6Q1 641 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 BRCA2P51587 3418 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 TMCO5BA8MYB1 307 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 PPP2R5CQ13362 524 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 GADL1Q6ZQY3 521 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 PDCD2LQ9BRP1 358 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 ELP3Q9H9T3 547 aa13.83□□□□□ -0.2
LIMK1-201ENST00000336180 SLC16A4O15374 487 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 FGFR1OPO95684 399 aaKnown RBP13.82□□□□□ -0.2
LIMK1-201ENST00000336180 CLCN6P51797 869 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 MAP3K10Q02779 954 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 ZNF668Q96K58 619 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-201ENST00000336180 GDAP1L1Q96MZ0 367 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 IFIH1Q9BYX4 1025 aaKnown RBP13.82□□□□□ -0.2
LIMK1-201ENST00000336180 EHMT1Q9H9B1 1298 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 ZNF408Q9H9D4 720 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 PXMP2Q9NR77 195 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 ADAMTS1Q9UHI8 967 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 PACSIN2Q9UNF0 486 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-201ENST00000336180 GOLGA6L9A6NEM1 432 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 CYLC1P35663 651 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-201ENST00000336180 PEX3P56589 373 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 VGLL4Q14135 290 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 SPA17Q15506 151 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
LIMK1-201ENST00000336180 LPAR1Q92633 364 aa13.82□□□□□ -0.2
LIMK1-201ENST00000336180 FRMD3A2A2Y4 597 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 CCDC169A6NNP5 214 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 RPS12P25398 132 aaKnown RBP13.81□□□□□ -0.2
LIMK1-201ENST00000336180 DCAF15Q66K64 600 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 SEPT14Q6ZU15 432 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 KLRG1Q96E93 195 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 NACC1Q96RE7 527 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 NAPGQ99747 312 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-201ENST00000336180 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 JADE2Q9NQC1 790 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 CD2APQ9Y5K6 639 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 COL2A1P02458 1487 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-201ENST00000336180 ZMYM2Q9UBW7 1377 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 DLG4P78352 724 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 EPHA7Q15375 998 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
LIMK1-201ENST00000336180 NR3C2P08235 984 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
LIMK1-201ENST00000336180 PPP1R2P41236 205 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 MAGEA1P43355 309 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 ARHGAP44Q17R89 818 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 ZNF526Q8TF50 670 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-201ENST00000336180 PLCD4Q9BRC7 762 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 CBWD1Q9BRT8 395 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 PCDHA13Q9Y5I0 950 aa13.81□□□□□ -0.2
LIMK1-201ENST00000336180 PITPNM2Q9BZ72 1349 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 MEA1Q16626 185 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 EAPPQ56P03 285 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-201ENST00000336180 SWSAP1Q6NVH7 229 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 EPM2AIP1Q7L775 607 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-201ENST00000336180 SPAG5Q96R06 1193 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 A1CFQ9NQ94 594 aaKnown RBP13.8□□□□□ -0.2
LIMK1-201ENST00000336180 GABBR1Q9UBS5 961 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 FECHP22830 423 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
LIMK1-201ENST00000336180 CHMP4BP1P59074 171 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 MAPK7Q13164 816 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 MCF2L2Q86YR7 1114 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms