RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SEL1LQ9UBV2 794 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 UBE2Q2LH0YL09 131 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 DYNC1LI2O43237 492 aaPredicted RBP16.25■□□□□ 0.19
C9orf47-201ENST00000334490 CETPP11597 493 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 LLGL1Q15334 1064 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 KRT71Q3SY84 523 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 FMR1NBQ8N0W7 255 aaPredicted RBP16.25■□□□□ 0.19
C9orf47-201ENST00000334490 KCNH4Q9UQ05 1017 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 PRCPP42785 496 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 PPARDQ03181 441 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 OR6J1Q8NGC5 347 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 ATG4CQ96DT6 458 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 ZMYND15Q9H091 742 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 SENP2Q9HC62 589 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 TNS2Q63HR2 1409 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 FAM205CA6NFA0 338 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 PSMC4P43686 418 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 GUCY2FP51841 1108 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 MTMR3Q13615 1198 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 KNOP1Q1ED39 458 aaKnown RBP16.24■□□□□ 0.19
C9orf47-201ENST00000334490 RFX6Q8HWS3 928 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 MB21D1Q8N884 522 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 SMC1BQ8NDV3 1235 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 KRT12Q99456 494 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 GCOM2Q9BZD3 368 aaPredicted RBP16.24■□□□□ 0.19
C9orf47-201ENST00000334490 ATP8B3O60423 1300 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
C9orf47-201ENST00000334490 ANXA13P27216 316 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 MAN1A1P33908 653 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 SETDB1Q15047 1291 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 DENND2CQ68D51 928 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 ZNF710Q8N1W2 664 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 ZDHHC15Q96MV8 337 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 SLC12A6Q9UHW9 1150 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
C9orf47-201ENST00000334490 ENC1O14682 589 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 CDC25BP30305 580 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 VSTM4Q8IW00 320 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 CCDC110Q8TBZ0 833 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 SH2D3AQ9BRG2 576 aa16.24■□□□□ 0.19
C9orf47-201ENST00000334490 EBAG9O00559 213 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 C6orf222P0C671 652 aaPredicted RBP16.23■□□□□ 0.19
C9orf47-201ENST00000334490 SCYL3Q8IZE3 742 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 RNF139Q8WU17 664 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 PHF20Q9BVI0 1012 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 ADAMTS1Q9UHI8 967 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 ZBBXA8MT70 800 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 PROM2Q8N271 834 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 SLC35F6Q8N357 371 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 JMJD4Q9H9V9 463 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 CYP27A1Q02318 531 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 HHATQ5VTY9 493 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 ADARB2Q9NS39 739 aaKnown RBP16.23■□□□□ 0.19
C9orf47-201ENST00000334490 ARHGAP23Q9P227 1491 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
C9orf47-201ENST00000334490 SPDYE2BA6NHP3 402 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 SH3BP5O60239 455 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 SERPING1P05155 500 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 SPDYE6P0CI01 402 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 CCDC121Q6ZUS5 278 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 GPRC5AQ8NFJ5 357 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 PPM1EQ8WY54 764 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 SPTLC3Q9NUV7 552 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 TYW1Q9NV66 732 aaKnown RBP16.22■□□□□ 0.19
C9orf47-201ENST00000334490 SLC25A27O95847 323 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 FGFR2P21802 821 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 PDIA5Q14554 519 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 CAPN12Q6ZSI9 719 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 MAGOHBQ96A72 148 aaKnown RBP16.22■□□□□ 0.19
C9orf47-201ENST00000334490 AGBL1Q96MI9 1066 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 MRPL4Q9BYD3 311 aaKnown RBP16.22■□□□□ 0.19
C9orf47-201ENST00000334490 DNAJC12Q9UKB3 198 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 SHC4Q6S5L8 630 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 BBS5Q8N3I7 341 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 CCNYQ8ND76 341 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 CALN1Q9BXU9 219 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 FBXO28Q9NVF7 368 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 PLSCR1O15162 318 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 CAP2P40123 477 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 ARL4AP40617 200 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 HAUS6Q7Z4H7 955 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 RNF149Q8NC42 400 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 SEPT1Q8WYJ6 367 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 CEP63Q96MT8 703 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 IL25Q9H293 177 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 NHEJ1Q9H9Q4 299 aaPredicted RBP16.22■□□□□ 0.19
C9orf47-201ENST00000334490 PPLO60437 1756 aa16.22■□□□□ 0.19
C9orf47-201ENST00000334490 HUS1O60921 280 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 EYA4O95677 639 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 PRR29P0C7W0 189 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 YWHABP31946 246 aaKnown RBP16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ZNF699Q32M78 642 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ALKBH5Q6P6C2 394 aaKnown RBP16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.21■□□□□ 0.19
C9orf47-201ENST00000334490 ACRBPQ8NEB7 543 aa16.21■□□□□ 0.19
C9orf47-201ENST00000334490 RRAGDQ9NQL2 400 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms