RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 RPL13P26373 211 aaKnown RBP9.9□□□□□ -0.82
COPB2-201ENST00000333188 QARSP47897 775 aaKnown RBP9.9□□□□□ -0.82
COPB2-201ENST00000333188 NT5C2P49902 561 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 KIF11P52732 1056 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
COPB2-201ENST00000333188 KIAA0753Q2KHM9 967 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 MIIPQ5JXC2 388 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 TRIM65Q6PJ69 517 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 PPM1KQ8N3J5 372 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 PDCD2LQ9BRP1 358 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 CBWD1Q9BRT8 395 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 GBP3Q9H0R5 595 aa9.9□□□□□ -0.82
COPB2-201ENST00000333188 LARSQ9P2J5 1176 aaKnown RBP9.9□□□□□ -0.82
COPB2-201ENST00000333188 DDX60LQ5H9U9 1706 aaKnown RBP9.9□□□□□ -0.83
COPB2-201ENST00000333188 IGLV3-22A0A075B6J6 115 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 A0A0U1RQG5 324 aaPredicted RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 POTEB2H3BUK9 544 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 HNRNPDLO14979 420 aaKnown RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 EYA4O95677 639 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 KRT13P13646 458 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 NOVP48745 357 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 LRRC63Q05C16 580 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 NAPGQ99747 312 aaPredicted RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 SLC38A10Q9HBR0 1119 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 VAV3Q9UKW4 847 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 ARAP2Q8WZ64 1704 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 ZNF536O15090 1300 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 ZBED6P86452 979 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 MAP2K1Q02750 393 aaPredicted RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 BIRC3Q13489 604 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 PGM5Q15124 567 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 ELOA2Q8IYF1 753 aaPredicted RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 U2AF1L4Q8WU68 220 aaKnown RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 POMGNT1Q8WZA1 660 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 KIAA1683Q9H0B3 1180 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 A1CFQ9NQ94 594 aaKnown RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 ST7Q9NRC1 585 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 FHOD1Q9Y613 1164 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 ATP1A1P05023 1023 aaKnown RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 SSR1P43307 286 aaKnown RBP9.89□□□□□ -0.83
COPB2-201ENST00000333188 KRT83P78385 493 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 SPIRE1Q08AE8 756 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 SLC9C1Q4G0N8 1177 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 NAA35Q5VZE5 725 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 ZBTB33Q86T24 672 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 LPAR1Q92633 364 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 ERO1AQ96HE7 468 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 TEX13BQ9BXU2 312 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 PACSIN1Q9BY11 444 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 COL4A5P29400 1685 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 NAV1Q8NEY1 1877 aa9.89□□□□□ -0.83
COPB2-201ENST00000333188 PSMD10O75832 226 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 POLGP54098 1239 aaPredicted RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 EHHADHQ08426 723 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 ASIC2Q16515 512 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 EPC2Q52LR7 807 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 WDR59Q6PJI9 974 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 TMCO3Q6UWJ1 677 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 APOBEC3FQ8IUX4 373 aaKnown RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 GSPT2Q8IYD1 628 aaKnown RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 NSUN6Q8TEA1 469 aaKnown RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 CLEC4DQ8WXI8 215 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
COPB2-201ENST00000333188 SECISBP2LQ93073 1101 aaKnown RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 CD2APQ9Y5K6 639 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 ANKRD31Q8N7Z5 1873 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 ATRNL1Q5VV63 1379 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 CTAGE15A4D2H0 777 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 P4HBP07237 508 aaKnown RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 CTAGE8P0CG41 777 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 KRT5P13647 590 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 GJC1P36383 396 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 Q4G0T1 1027 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 C2CD6Q53TS8 623 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 BTNL9Q6UXG8 535 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 LRRC55Q6ZSA7 311 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 CTAGE6Q86UF2 777 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 CTAGE4Q8IX94 777 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 KLRG1Q96E93 195 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 PI4K2AQ9BTU6 479 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 HAUS4Q9H6D7 363 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 RNF19AQ9NV58 838 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 ARHGAP20Q9P2F6 1191 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 MYO1AQ9UBC5 1043 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 CAPN11Q9UMQ6 739 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 DENND3A2RUS2 1198 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 GOLGA6L9A6NEM1 432 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 AFPP02771 609 aaKnown RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 RPS12P25398 132 aaKnown RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 PTGER2P43116 358 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 ACOT2P49753 483 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 SLC7A5Q01650 507 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 LY6KQ17RY6 165 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 CT47A1Q5JQC4 288 aaPredicted RBP9.88□□□□□ -0.83
COPB2-201ENST00000333188 HAUS6Q7Z4H7 955 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 LRRC71Q8N4P6 559 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 HSD17B14Q9BPX1 270 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 KMT5AQ9NQR1 393 aa9.88□□□□□ -0.83
COPB2-201ENST00000333188 PXMP2Q9NR77 195 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms