RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PRKCIP41743 596 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 PREPLQ4J6C6 727 aaPredicted RBP25.71■■□□□ 1.71
TSKU-201ENST00000333090 GJB7Q6PEY0 223 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 POTEGQ6S5H5 508 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 POTEEQ6S8J3 1075 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 FRMD5Q7Z6J6 570 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 SLFN11Q7Z7L1 901 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 ADGRF4Q8IZF3 695 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 SGSM3Q96HU1 749 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 FAM114A2Q9NRY5 505 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 STXBP5LQ9Y2K9 1186 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 PRPF4BQ13523 1007 aaKnown RBP25.7■■□□□ 1.7
TSKU-201ENST00000333090 ZNF804AQ7Z570 1209 aa25.7■■□□□ 1.7
TSKU-201ENST00000333090 SYCE1Q8N0S2 351 aa25.7■■□□□ 1.7
TSKU-201ENST00000333090 FMO2Q99518 471 aa25.7■■□□□ 1.7
TSKU-201ENST00000333090 NR2E1Q9Y466 385 aa25.7■■□□□ 1.7
TSKU-201ENST00000333090 CLK2P49760 499 aaKnown RBP25.7■■□□□ 1.7
TSKU-201ENST00000333090 ADAT2Q7Z6V5 191 aaKnown RBP25.7■■□□□ 1.7
TSKU-201ENST00000333090 RTCBQ9Y3I0 505 aaKnown RBP25.7■■□□□ 1.7
TSKU-201ENST00000333090 DDX3XO00571 662 aaKnown RBP eCLIP25.69■■□□□ 1.71e-7■■■■■ 37.8
TSKU-201ENST00000333090 MED24O75448 989 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 COL5A3P25940 1745 aaPredicted RBP25.69■■□□□ 1.7
TSKU-201ENST00000333090 MRPL12P52815 198 aaKnown RBP25.69■■□□□ 1.7
TSKU-201ENST00000333090 TTBK2Q6IQ55 1244 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 SEC14L1Q92503 715 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 PNMA2Q9UL42 364 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 CNTNAP4Q9C0A0 1308 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 GPR75-ASB3A0A0A6YYF3 556 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 AKAP3O75969 853 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 GCFC2P16383 781 aaKnown RBP25.69■■□□□ 1.7
TSKU-201ENST00000333090 SLC16A2P36021 539 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 NOVP48745 357 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 PSTPIP2Q9H939 334 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 OSGEPQ9NPF4 335 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 AMFRQ9UKV5 643 aa25.69■■□□□ 1.7
TSKU-201ENST00000333090 CTNND1O60716 968 aaKnown RBP25.68■■□□□ 1.7
TSKU-201ENST00000333090 CAND2O75155 1236 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 DRD4P21917 467 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 SF3A3Q12874 501 aaKnown RBP eCLIP25.68■■□□□ 1.7
TSKU-201ENST00000333090 KNOP1Q1ED39 458 aaKnown RBP25.68■■□□□ 1.7
TSKU-201ENST00000333090 HVCN1Q96D96 273 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 HES6Q96HZ4 224 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 DHX36Q9H2U1 1008 aaKnown RBP25.68■■□□□ 1.7
TSKU-201ENST00000333090 GOPCQ9HD26 462 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 GCNT4Q9P109 453 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 SWAP70Q9UH65 585 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 SLC12A3P55017 1021 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 EPHA7Q15375 998 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 CHMP6Q96FZ7 201 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 TRAF3IP3Q9Y228 551 aa25.68■■□□□ 1.7
TSKU-201ENST00000333090 ATAD5Q96QE3 1844 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 FRMD3A2A2Y4 597 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 GFPT2O94808 682 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 COPB2P35606 906 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 GALCP54803 685 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 FAM228AQ86W67 206 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 SFR1Q86XK3 245 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 MCM8Q9UJA3 840 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 TPX2Q9ULW0 747 aaKnown RBP25.67■■□□□ 1.7
TSKU-201ENST00000333090 NENFQ9UMX5 172 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 A0A0A6YYK5 440 aaPredicted RBP25.67■■□□□ 1.7
TSKU-201ENST00000333090 NF2P35240 595 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 RFC4P35249 363 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 PPP1R18Q6NYC8 613 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 RPAINQ86UA6 219 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 CCT6BQ92526 530 aa25.67■■□□□ 1.7
TSKU-201ENST00000333090 XPO6Q96QU8 1125 aaKnown RBP25.67■■□□□ 1.7
TSKU-201ENST00000333090 CNOT10Q9H9A5 744 aaKnown RBP25.67■■□□□ 1.7
TSKU-201ENST00000333090 USP17L15C9J2P7 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L13C9JLJ4 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L11C9JVI0 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L18D6R9N7 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L22D6RA61 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L17D6RBQ6 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L19D6RCP7 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L20D6RJB6 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 MEIS1O00470 390 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 OPLAHO14841 1288 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 BUB1BO60566 1050 aaPredicted RBP25.66■■□□□ 1.7
TSKU-201ENST00000333090 AKR1B1P15121 316 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 RHBDL3P58872 404 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 USP17L24Q0WX57 530 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 PABPC4Q13310 644 aaKnown RBP eCLIP25.66■■□□□ 1.74e-8■■■□□ 16
TSKU-201ENST00000333090 USP17L6PQ6QN14 398 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 ATP8B4Q8TF62 1192 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 ODF2LQ9ULJ1 636 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 F8W031 263 aaPredicted RBP25.66■■□□□ 1.7
TSKU-201ENST00000333090 HOXD13P35453 343 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 CASP4P49662 377 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 POU5F1Q01860 360 aaKnown RBP25.66■■□□□ 1.7
TSKU-201ENST00000333090 LACTB2Q53H82 288 aaPredicted RBP25.66■■□□□ 1.7
TSKU-201ENST00000333090 CHADLQ6NUI6 762 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 DPP8Q6V1X1 898 aaPredicted RBP25.66■■□□□ 1.7
TSKU-201ENST00000333090 TLCD1Q96CP7 247 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 SIX2Q9NPC8 291 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 PITPNM2Q9BZ72 1349 aa25.66■■□□□ 1.7
TSKU-201ENST00000333090 PPFIA2O75334 1257 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 SHBGP04278 402 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 SNHG28P0DPA3 235 aa25.65■■□□□ 1.7
TSKU-201ENST00000333090 PLCG2P16885 1265 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms