RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 HTTP42858 3142 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 USO1O60763 962 aaKnown RBP13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 MMP3P08254 477 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 ELNP15502 786 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 TRIM32Q13049 653 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 XKR9Q5GH70 373 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 OTUD6AQ7L8S5 288 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 TLK2Q86UE8 772 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 CCDC65Q8IXS2 484 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 KIAA0895Q8NCT3 520 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 GLG1Q92896 1179 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 BPIFA3Q9BQP9 254 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 BEGAINQ9BUH8 593 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 NAT10Q9H0A0 1025 aaKnown RBP13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 FAM184BQ9ULE4 1060 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 MYH11P35749 1972 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 CEP350Q5VT06 3117 aa13.42□□□□□ -0.26
TRIM49B-201ENST00000332682 PPP1R3GB7ZBB8 358 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 TBCAO75347 108 aaKnown RBP13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 LGALS2P05162 132 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 AKR1A1P14550 325 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 SLC26A2P50443 739 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 STK4Q13043 487 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 MAPK7Q13164 816 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 IQCB1Q15051 598 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 LUZP1Q86V48 1076 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 FAM167AQ96KS9 214 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 CEP170P1Q96L14 293 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 GTPBP4Q9BZE4 634 aaKnown RBP13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 SMARCAD1Q9H4L7 1026 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 GRPEL1Q9HAV7 217 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 CYP26B1Q9NR63 512 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 ODF2LQ9ULJ1 636 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 Q9Y3F1 56 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 PCDHA2Q9Y5H9 948 aa13.41□□□□□ -0.26
TRIM49B-201ENST00000332682 A6NJR5 290 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 ADCY3O60266 1144 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 HIP1RO75146 1068 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 PPFIA4O75335 1185 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 ZNF286BP0CG31 522 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 MARK3P27448 753 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 PRCPP42785 496 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 ZNF131P52739 623 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 CACNB2Q08289 660 aaPredicted RBP13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 PSMD2Q13200 908 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 ARHGEF6Q15052 776 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 MTERF2Q49AM1 385 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 FAM26FQ5R3K3 315 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 SFR1Q86XK3 245 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 DHX40Q8IX18 779 aaKnown RBP13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 DAW1Q8N136 415 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 RAET1EQ8TD07 263 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 ATP8B4Q8TF62 1192 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 CEP89Q96ST8 783 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 C16orf70Q9BSU1 422 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 ZHX3Q9H4I2 956 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 SLC39A2Q9NP94 309 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 COL4A3BPQ9Y5P4 624 aa13.4□□□□□ -0.26
TRIM49B-201ENST00000332682 DGAT1O75907 488 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 HMGCRP04035 888 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 ERCC5P28715 1186 aaPredicted RBP13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 PLCB4Q15147 1175 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 TARBP2Q15633 366 aaKnown RBP13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 DGKDQ16760 1214 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 COBLL1Q53SF7 1204 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 HERC4Q5GLZ8 1057 aaPredicted RBP13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 CT47A1Q5JQC4 288 aaPredicted RBP13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 MAP3K21Q5TCX8 1036 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 DNAJC5GQ8N7S2 189 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 GLIS3Q8NEA6 775 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 MED15Q96RN5 788 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 TIPINQ9BVW5 301 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 FGFBP2Q9BYJ0 223 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 NRBP2Q9NSY0 501 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 ERAP1Q9NZ08 941 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 MAPK8IP1Q9UQF2 711 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 SEPT4O43236 478 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 FAM13AO94988 1023 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 GAP43P17677 238 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 MRE11P49959 708 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 PRMT2P55345 433 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 NCAPHQ15003 741 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 KLHL10Q6JEL2 608 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms