RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NEK9Q8TD19 979 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 CAPZA3Q96KX2 299 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 FIZ1Q96SL8 496 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 MMS19Q96T76 1030 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 PLCB1Q9NQ66 1216 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 JADE2Q9NQC1 790 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 AIPL1Q9NZN9 384 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 PKD2L1Q9P0L9 805 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 ASTN2O75129 1339 aaPredicted RBP19.09■□□□□ 0.65
DDX28-201ENST00000332395 LOXHD1Q8IVV2 1947 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 FLOT1O75955 427 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 SLC9A1P19634 815 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 PLA2G4AP47712 749 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 EXOC3L4Q17RC7 722 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 TCERG1LQ5VWI1 586 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 DPY19L2P1Q6NXN4 242 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 NIPA1Q7RTP0 329 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 SAMD7Q7Z3H4 446 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 FAM178BQ8IXR5 827 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 MICALL2Q8IY33 904 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 SLC35C1Q96A29 364 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 HOMER2Q9NSB8 354 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 UBE4BO95155 1302 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 ACTN1P12814 892 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 VCAM1P19320 739 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 RASSF7Q02833 373 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 CKAP4Q07065 602 aaKnown RBP19.08■□□□□ 0.65
DDX28-201ENST00000332395 MTMR2Q13614 643 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 LONRF2Q1L5Z9 754 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 MUM1L1Q5H9M0 696 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 PCNX4Q63HM2 1172 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 ZNF720Q7Z2F6 126 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 MIER3Q7Z3K6 550 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 FAM133AQ8N9E0 248 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 HNRNPLLQ8WVV9 542 aaKnown RBP19.08■□□□□ 0.65
DDX28-201ENST00000332395 ALS2CR12Q96Q35 445 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 IKZF4Q9H2S9 585 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 PCDHB13Q9Y5F0 798 aa19.08■□□□□ 0.65
DDX28-201ENST00000332395 ARHGEF35A5YM69 484 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 GUCY2CP25092 1073 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 PON1P27169 355 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 GMPSP49915 693 aaPredicted RBP19.08■□□□□ 0.64
DDX28-201ENST00000332395 ARID5AQ03989 594 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 ASIC2Q16515 512 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 NFIL3Q16649 462 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 TKFCQ3LXA3 575 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 SYTL5Q8TDW5 730 aaPredicted RBP19.08■□□□□ 0.64
DDX28-201ENST00000332395 BBXQ8WY36 941 aaPredicted RBP19.08■□□□□ 0.64
DDX28-201ENST00000332395 CALCOCO1Q9P1Z2 691 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 SALL4Q9UJQ4 1053 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 PPP1R9AQ9ULJ8 1098 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 SNX12Q9UMY4 172 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 UBIAD1Q9Y5Z9 338 aa19.08■□□□□ 0.64
DDX28-201ENST00000332395 ZNF185O15231 689 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 DHX15O43143 795 aaKnown RBP19.07■□□□□ 0.64
DDX28-201ENST00000332395 UCHL3P15374 230 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 MRPS9P82933 396 aaKnown RBP19.07■□□□□ 0.64
DDX28-201ENST00000332395 KLHL30Q0D2K2 578 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 TBC1D10BQ4KMP7 808 aaPredicted RBP19.07■□□□□ 0.64
DDX28-201ENST00000332395 ODR4Q5SWX8 454 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 KLHDC7AQ5VTJ3 777 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 STXBP4Q6ZWJ1 553 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 ANKRD13CQ8N6S4 541 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 BORCS6Q96GS4 357 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 RPGRIP1Q96KN7 1286 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 FUT8Q9BYC5 575 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 AGO4Q9HCK5 861 aaKnown RBP19.07■□□□□ 0.64
DDX28-201ENST00000332395 PPP1R1BQ9UD71 204 aaPredicted RBP19.07■□□□□ 0.64
DDX28-201ENST00000332395 HACL1Q9UJ83 578 aa19.07■□□□□ 0.64
DDX28-201ENST00000332395 ITGB3BPQ13352 177 aaPredicted RBP19.06■□□□□ 0.64
DDX28-201ENST00000332395 SLC18A3Q16572 532 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 KSR1Q8IVT5 923 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 DRC1Q96MC2 740 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 LUC7LQ9NQ29 371 aaKnown RBP19.06■□□□□ 0.64
DDX28-201ENST00000332395 MAP3K20Q9NYL2 800 aaKnown RBP19.06■□□□□ 0.64
DDX28-201ENST00000332395 P4HBP07237 508 aaKnown RBP19.06■□□□□ 0.64
DDX28-201ENST00000332395 TUBBP07437 444 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 CYP2C19P33261 490 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 PSMC2P35998 433 aaKnown RBP19.06■□□□□ 0.64
DDX28-201ENST00000332395 RPS6P62753 249 aaKnown RBP19.06■□□□□ 0.64
DDX28-201ENST00000332395 VSNL1P62760 191 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 GBP6Q6ZN66 633 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 HS2ST1Q7LGA3 356 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 FAM186BQ8IYM0 893 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 CAGE1Q8TC20 777 aa19.06■□□□□ 0.64
DDX28-201ENST00000332395 RPAP3Q9H6T3 665 aaPredicted RBP19.06■□□□□ 0.64
DDX28-201ENST00000332395 ERICH4A6NGS2 130 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 HIP1RO75146 1068 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 ERLIN1O75477 346 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 MTMR1Q13613 665 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 COG2Q14746 738 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 ENOX2Q16206 610 aaKnown RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 BEND6Q5SZJ8 279 aaPredicted RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 NBPF12Q5TAG4 269 aaPredicted RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 RNF10Q8N5U6 811 aaKnown RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 NOX5Q96PH1 765 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 SPAG5Q96R06 1193 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 TAAR1Q96RJ0 339 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 CNOT7Q9UIV1 285 aaKnown RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 GJA3Q9Y6H8 435 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms