RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CCNT1O60563 726 aaKnown RBP19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 BAG3O95817 575 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 ENOX2Q16206 610 aaKnown RBP19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 LETM2Q2VYF4 491 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 DYMQ7RTS9 669 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 PNMA8AQ86V59 439 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 FAM133AQ8N9E0 248 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 LRRC57Q8N9N7 239 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 SEC14L1Q92503 715 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 DCP1AQ9NPI6 582 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 COL4A3BPQ9Y5P4 624 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 TSPY2A6NKD2 308 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 ANP32DO95626 131 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 MMEP08473 750 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 ITGA4P13612 1032 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 EIF3BP55884 814 aaKnown RBP19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 DIXDC1Q155Q3 683 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 ASIC2Q16515 512 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 PTPROQ16827 1216 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 METTL13Q8N6R0 699 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 EYA3Q99504 573 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 SLITRK6Q9H5Y7 841 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 TTI1O43156 1089 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 CHN1P15882 459 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 GTF2IP78347 998 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 GRB10Q13322 594 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 SLC35G1Q2M3R5 365 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 PIGWQ7Z7B1 504 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 TBC1D1Q86TI0 1168 aaPredicted RBP19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 GLIS3Q8NEA6 775 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 SLC16A10Q8TF71 515 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 ATXN2LQ8WWM7 1075 aaKnown RBP19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 L3MBTL3Q96JM7 780 aaPredicted RBP19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 RIC8AQ9NPQ8 531 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 BARHL2Q9NY43 387 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 AIPL1Q9NZN9 384 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 CAND2O75155 1236 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 PPP4CP60510 307 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 LRRC41Q15345 812 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 CHADLQ6NUI6 762 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 BZW1Q7L1Q6 419 aaKnown RBP19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 HOOK3Q86VS8 718 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 FAM114A2Q9NRY5 505 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 TRPC6Q9Y210 931 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 L3MBTL1Q9Y468 752 aa19.71■□□□□ 0.75
CLSTN3-202ENST00000331148 PPFIA2O75334 1257 aa19.7■□□□□ 0.74
CLSTN3-202ENST00000331148 GCKP35557 465 aa19.7■□□□□ 0.74
CLSTN3-202ENST00000331148 CCDC26Q8TAB7 109 aa19.7■□□□□ 0.74
CLSTN3-202ENST00000331148 LMBR1Q8WVP7 490 aa19.7■□□□□ 0.74
CLSTN3-202ENST00000331148 TXLNGYQ9BZA5 131 aa19.7■□□□□ 0.74
CLSTN3-202ENST00000331148 DPH5Q9H2P9 285 aa19.7■□□□□ 0.74
CLSTN3-202ENST00000331148 STK17AQ9UEE5 414 aa19.7■□□□□ 0.74
CLSTN3-202ENST00000331148 G3V3G9 751 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 CYP2D6P10635 497 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SF3A3Q12874 501 aaKnown RBP eCLIP19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 GRM4Q14833 912 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 IFI16Q16666 785 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 FAM133BQ5BKY9 247 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SPDYCQ5MJ68 293 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 DCAF8Q5TAQ9 597 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 FOXR2Q6PJQ5 311 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SLF2Q8IX21 1173 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 LRRC34Q8IZ02 419 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 AGAP11Q8TF27 550 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 LARP4BQ92615 738 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SPDL1Q96EA4 605 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SELENOSQ9BQE4 189 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 ATP8A1Q9Y2Q0 1164 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SLX4Q8IY92 1834 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 MYH7BA7E2Y1 1941 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 ZNF268Q14587 947 aaPredicted RBP19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 DOK7Q18PE1 504 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 ZCWPW2Q504Y3 356 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 TRPM8Q7Z2W7 1104 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 KRT25Q7Z3Z0 450 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 RASGEF1CQ8N431 466 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 PNMA1Q8ND90 353 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 PNMA5Q96PV4 448 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SPAG5Q96R06 1193 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 CELF4Q9BZC1 486 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 KCNMB3Q9NPA1 279 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 NOP53Q9NZM5 478 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 SAMD15Q9P1V8 674 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 MAD2L2Q9UI95 211 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 AGAP1Q9UPQ3 857 aa19.69■□□□□ 0.74
CLSTN3-202ENST00000331148 ALADP13716 330 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 MMP13P45452 471 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 FKBP3Q00688 224 aaKnown RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 SLMAPQ14BN4 828 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 NONOQ15233 471 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 SBK1Q52WX2 424 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 C10orf76Q5T2E6 689 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 CDCA2Q69YH5 1023 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 ARMC2Q8NEN0 867 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 SH3RF3Q8TEJ3 882 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 ZNF483Q8TF39 744 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 FAM163AQ96GL9 167 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 ZNF570Q96NI8 536 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 RTFDC1Q9BY42 306 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 GANQ9H2C0 597 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms