RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SEPT3Q9UH03 358 aa13.64□□□□□ -0.23
RAB11FIP1-202ENST00000330843 AP1B1Q10567 949 aa13.64□□□□□ -0.23
RAB11FIP1-202ENST00000330843 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
RAB11FIP1-202ENST00000330843 VPS11Q9H270 941 aa13.64□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 COPS2P61201 443 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 RBBP7Q16576 425 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ZSCAN10Q96SZ4 725 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 MLXIPQ9HAP2 919 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 CPSF3Q9UKF6 684 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 LINC00854A0A1B0GVQ3 168 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 TCP11X1B4DZS4 312 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 POU5F1BQ06416 359 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PPARAQ07869 468 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ATAD3BQ5T9A4 648 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 CNBD2Q96M20 576 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 NT5C1BQ96P26 610 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 EYA3Q99504 573 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SEPT9Q9UHD8 586 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PSMC2P35998 433 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 BRDTQ58F21 947 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 CC2D1AQ6P1N0 951 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 LRRC8BQ6P9F7 803 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 TRIM11Q96F44 468 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 A0A0D9SFI3 127 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 LRRIQ3A6PVS8 624 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 XPO1O14980 1071 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ODR4Q5SWX8 454 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 BZW1Q7L1Q6 419 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ZBTB8OSQ8IWT0 167 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 TEX12Q9BXU0 123 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 CD58P19256 250 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 TAC1P20366 129 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 COPB2P35606 906 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 DEFA1P59665 94 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 DEFA3P59666 94 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 DNAJC24Q6P3W2 148 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 HEMGNQ9BXL5 484 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 MEIS1O00470 390 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 BNIP3LO60238 219 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PGM1P36871 562 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 POLA2Q14181 598 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 FAM26FQ5R3K3 315 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PABPC4Q13310 644 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 MCM8Q9UJA3 840 aa13.63□□□□□ -0.23
RAB11FIP1-202ENST00000330843 STX3Q13277 289 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SCARA5Q6ZMJ2 495 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ATXN7L3BQ96GX2 97 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 COL4A3BPQ9Y5P4 624 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 CTIFO43310 598 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 EPAS1Q99814 870 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SARS2Q9NP81 518 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 UBE4BO95155 1302 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 RASGRP4Q8TDF6 673 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 DONSONQ9NYP3 566 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 MAP3K5Q99683 1374 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ZBTB24O43167 697 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 KLHL18O94889 574 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ZBED1O96006 694 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 HMGB2P26583 209 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PMS2P54278 862 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 NCAPG2Q86XI2 1143 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 P2RX5Q93086 422 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 EYA2O00167 538 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 DNALI1O14645 258 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SLFNL1Q499Z3 407 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ANKRD36BP1Q96IX9 119 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ARHGEF3Q9NR81 526 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 CFAP73A6NFT4 308 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 AP3B1O00203 1094 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SNX2O60749 519 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ZNF658Q5TYW1 1059 aaPredicted RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 RSRC2Q7L4I2 434 aaKnown RBP13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PNMA2Q9UL42 364 aa13.62□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ESYT3A0FGR9 886 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PFKFB2O60825 505 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ARFIP2P53365 341 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 CCNYL1Q8N7R7 359 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 HDAC6Q9UBN7 1215 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 NXF1Q9UBU9 619 aaKnown RBP13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 ADCY9O60503 1353 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SLC9A1P19634 815 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 UBXN2AP68543 259 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 KCTD17Q8N5Z5 321 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 OSBPL9Q96SU4 736 aa13.61□□□□□ -0.23
RAB11FIP1-202ENST00000330843 SYBUQ9NX95 663 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms