RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
CCDC60-201ENST00000327554 ZDHHC24Q6UX98 284 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 DAAM2Q86T65 1068 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 ERP44Q9BS26 406 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 GOPCQ9HD26 462 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC60-201ENST00000327554 RPTORQ8N122 1335 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 FGGP02679 453 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 SLC29A2Q14542 456 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 NONOQ15233 471 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC60-201ENST00000327554 PNMA1Q8ND90 353 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 RAD54LQ92698 747 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 DDX12PQ92771 950 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 OSBPL1AQ9BXW6 950 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 PNMA3Q9UL41 463 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 TRIM33Q9UPN9 1127 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 STK38LQ9Y2H1 464 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 ZNF804BA4D1E1 1349 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 ATP8B3O60423 1300 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 GOLGA6L10A0A0M3HER8 536 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 ATP4AP20648 1035 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 TAF11Q15544 211 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 C6orf118Q5T5N4 469 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 KRT25Q7Z3Z0 450 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 GBP7Q8N8V2 638 aaPredicted RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 TBC1D16Q8TBP0 767 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 NAF1Q96HR8 494 aaKnown RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 THRAP3Q9Y2W1 955 aaKnown RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 A0A0A6YYK5 440 aaPredicted RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 ACTN1P12814 892 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 TXKP42681 527 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 DR1Q01658 176 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 DCAF12L1Q5VU92 463 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 NEK8Q86SG6 692 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 FBXO25Q8TCJ0 367 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 EPS8L3Q8TE67 593 aaKnown RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 ANKRD27Q96NW4 1050 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 TMEM109Q9BVC6 243 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 FGFBP2Q9BYJ0 223 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 ERVK-5Q9HDB9 667 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 DCP1AQ9NPI6 582 aaPredicted RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 IL17RBQ9NRM6 502 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 FGFR1OP2Q9NVK5 253 aa13.87□□□□□ -0.19
CCDC60-201ENST00000327554 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
CCDC60-201ENST00000327554 IRF6O14896 467 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 WFS1O76024 890 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 UPP2O95045 317 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 GJB6O95452 261 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 COPB2P35606 906 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 PLTPP55058 493 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 COASYQ13057 564 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 DNAJC19Q96DA6 116 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 IFT74Q96LB3 600 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 DAAM1Q9Y4D1 1078 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 SCN7AQ01118 1682 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 COL4A1P02462 1669 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 EIF4E1BA6NMX2 242 aaKnown RBP13.86□□□□□ -0.19
CCDC60-201ENST00000327554 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
CCDC60-201ENST00000327554 SUN1O94901 812 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 STARD3NLO95772 234 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 GNA14O95837 355 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 CTCFP49711 727 aaPredicted RBP13.86□□□□□ -0.19
CCDC60-201ENST00000327554 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
CCDC60-201ENST00000327554 SYCE1Q8N0S2 351 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 FITM2Q8N6M3 262 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 TEX9Q8N6V9 391 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 RBM46Q8TBY0 533 aaKnown RBP13.86□□□□□ -0.19
CCDC60-201ENST00000327554 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
CCDC60-201ENST00000327554 GLG1Q92896 1179 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 MTMR9Q96QG7 549 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 NUDT12Q9BQG2 462 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 SEMA4AQ9H3S1 761 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 GRHL1Q9NZI5 618 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
CCDC60-201ENST00000327554 BZW2Q9Y6E2 419 aaKnown RBP13.86□□□□□ -0.19
CCDC60-201ENST00000327554 DPPA5A6NC42 116 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 DDX3YO15523 660 aaKnown RBP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 H2AFZP0C0S5 128 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 GNAZP19086 355 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 PRKCIP41743 596 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 GNAQP50148 359 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 NPEPPSP55786 919 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 ATP11AP98196 1134 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 SNX1Q13596 522 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 AUHQ13825 339 aaKnown RBP13.85□□□□□ -0.19
CCDC60-201ENST00000327554 ANO7Q6IWH7 933 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 SLC30A9Q6PML9 568 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 H2AFVQ71UI9 128 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 CDK5RAP3Q96JB5 506 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 SNX24Q9Y343 169 aa13.85□□□□□ -0.19
CCDC60-201ENST00000327554 FAM187AA6NFU0 413 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms