RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 AADACL2Q6P093 401 aa21.68■■□□□ 1.06
CRLF3-201ENST00000324238 BTAF1O14981 1849 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 IGKV6D-41A0A0C4DH26 115 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 SMIM23A6NLE4 172 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 SPATA31C1P0DKV0 1188 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 USP11P51784 963 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 ARHGAP4P98171 946 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 ORC2Q13416 577 aaPredicted RBP21.67■■□□□ 1.06
CRLF3-201ENST00000324238 CTTNQ14247 550 aaKnown RBP21.67■■□□□ 1.06
CRLF3-201ENST00000324238 KDM7AQ6ZMT4 941 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 TPCN2Q8NHX9 752 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 UHMK1Q8TAS1 419 aaKnown RBP21.67■■□□□ 1.06
CRLF3-201ENST00000324238 FAM163AQ96GL9 167 aaPredicted RBP21.67■■□□□ 1.06
CRLF3-201ENST00000324238 ATF5Q9Y2D1 282 aaPredicted RBP21.67■■□□□ 1.06
CRLF3-201ENST00000324238 DDX3XO00571 662 aaKnown RBP eCLIP21.67■■□□□ 1.062e-17■■■■□ 22.6
CRLF3-201ENST00000324238 HLA-DOAP06340 250 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 MDH1P40925 334 aaKnown RBP21.67■■□□□ 1.06
CRLF3-201ENST00000324238 ITGB3BPQ13352 177 aaPredicted RBP21.67■■□□□ 1.06
CRLF3-201ENST00000324238 NLRP14Q86W24 1093 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 LRRC57Q8N9N7 239 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 EPN3Q9H201 632 aa21.67■■□□□ 1.06
CRLF3-201ENST00000324238 LRRN2O75325 713 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 KIAA0754O94854 1291 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 SLFN13Q68D06 897 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 RNF14Q9UBS8 474 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 DNM3Q9UQ16 869 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 MYH4Q9Y623 1939 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 EML1O00423 815 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 MEIS2O14770 477 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 GNA14O95837 355 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 NR3C1P04150 777 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 MNAT1P51948 309 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 MYCBPAPQ8TBZ2 947 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 KCNMB3Q9NPA1 279 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 CNOT8Q9UFF9 292 aaKnown RBP21.66■■□□□ 1.06
CRLF3-201ENST00000324238 NOVA2Q9UNW9 492 aaKnown RBP21.66■■□□□ 1.06
CRLF3-201ENST00000324238 MAST2Q6P0Q8 1798 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 SBF2Q86WG5 1849 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 TRIM49P0CI25 452 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 TRIM49CP0CI26 452 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 ZNF844Q08AG5 666 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 MDM1Q8TC05 714 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 TEKT1Q969V4 418 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.66■■□□□ 1.06
CRLF3-201ENST00000324238 SCAF8Q9UPN6 1271 aaKnown RBP21.66■■□□□ 1.06
CRLF3-201ENST00000324238 KDM3AQ9Y4C1 1321 aa21.66■■□□□ 1.06
CRLF3-201ENST00000324238 GOLGA6L10A6NI86 522 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 ZYXQ15942 572 aaKnown RBP21.65■■□□□ 1.06
CRLF3-201ENST00000324238 QPCTQ16769 361 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 ARHGAP44Q17R89 818 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 SPRED3Q2MJR0 410 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 MAEAQ7L5Y9 396 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 PALB2Q86YC2 1186 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 CERKQ8TCT0 537 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 ISCUQ9H1K1 167 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 TMEM59LQ9UK28 342 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 IGSF9BQ9UPX0 1349 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 GCOM1H8Y6P7 765 aaPredicted RBP21.65■■□□□ 1.06
CRLF3-201ENST00000324238 FGGP02679 453 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 MYZAPP0CAP1 466 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 GALCP54803 685 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 CERKLQ49MI3 558 aaPredicted RBP21.65■■□□□ 1.06
CRLF3-201ENST00000324238 C15orf52Q6ZUT6 534 aaKnown RBP21.65■■□□□ 1.06
CRLF3-201ENST00000324238 WHAMMQ8TF30 809 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 SCFD2Q8WU76 684 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 SIX2Q9NPC8 291 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 TAS2R14Q9NYV8 317 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 PPP1R9AQ9ULJ8 1098 aa21.65■■□□□ 1.06
CRLF3-201ENST00000324238 hCG_1984214I3L0E3 225 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 PGRMC1O00264 195 aaKnown RBP21.64■■□□□ 1.06
CRLF3-201ENST00000324238 H2AFZP0C0S5 128 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 CRKP46108 304 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 EPHA7Q15375 998 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 TBC1D10BQ4KMP7 808 aaPredicted RBP21.64■■□□□ 1.06
CRLF3-201ENST00000324238 H2AFVQ71UI9 128 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 ZNF713Q8N859 430 aaPredicted RBP21.64■■□□□ 1.06
CRLF3-201ENST00000324238 GLG1Q92896 1179 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 SLC35C1Q96A29 364 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 TMBIM4Q9HC24 238 aa21.64■■□□□ 1.06
CRLF3-201ENST00000324238 HSPA9P38646 679 aaKnown RBP21.64■■□□□ 1.05
CRLF3-201ENST00000324238 CYP2J2P51589 502 aa21.64■■□□□ 1.05
CRLF3-201ENST00000324238 DHX9Q08211 1270 aaKnown RBP21.64■■□□□ 1.05
CRLF3-201ENST00000324238 SPIRE1Q08AE8 756 aa21.64■■□□□ 1.05
CRLF3-201ENST00000324238 UBAP2Q5T6F2 1119 aaKnown RBP21.64■■□□□ 1.05
CRLF3-201ENST00000324238 MMS22LQ6ZRQ5 1243 aa21.64■■□□□ 1.05
CRLF3-201ENST00000324238 CDK5RAP2Q96SN8 1893 aa21.64■■□□□ 1.05
CRLF3-201ENST00000324238 ATP8A1Q9Y2Q0 1164 aa21.64■■□□□ 1.05
CRLF3-201ENST00000324238 ASTN1O14525 1302 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 JAG1P78504 1218 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 TPH2Q8IWU9 490 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 DHX37Q8IY37 1157 aaKnown RBP21.63■■□□□ 1.05
CRLF3-201ENST00000324238 LNX1Q8TBB1 728 aaPredicted RBP21.63■■□□□ 1.05
CRLF3-201ENST00000324238 RUBCNQ92622 972 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 COA1Q9GZY4 146 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 GOPCQ9HD26 462 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 AFF2P51816 1311 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 MEFVO15553 781 aaPredicted RBP21.63■■□□□ 1.05
CRLF3-201ENST00000324238 BUB1BO60566 1050 aaPredicted RBP21.63■■□□□ 1.05
CRLF3-201ENST00000324238 HYIQ5T013 277 aa21.63■■□□□ 1.05
CRLF3-201ENST00000324238 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms