RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 IVLP07476 585 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 USP8P40818 1118 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CXCL9Q07325 125 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 LONRF2Q1L5Z9 754 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 ICE2Q659A1 982 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 FAM207AQ9NSI2 230 aaPredicted RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 CTAGE15A4D2H0 777 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CLGNO14967 610 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 AKAP3O75969 853 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CTAGE8P0CG41 777 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.33e-12■■■□□ 16.1
NCL-201ENST00000322723 ADAM9Q13443 819 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CTAGE6Q86UF2 777 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CTAGE4Q8IX94 777 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 DAW1Q8N136 415 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 ADAMTS5Q9UNA0 930 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 RHOXF2BP0C7M4 288 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 SLC18A3Q16572 532 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 KLHDC7AQ5VTJ3 777 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 PCNX4Q63HM2 1172 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 REPS2Q8NFH8 660 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CCDC42Q96M95 316 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 RUFY1Q96T51 708 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 RHOXF2Q9BQY4 288 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 SLC38A10Q9HBR0 1119 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 RAD17O75943 681 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 ASNSP08243 561 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 ITGB5P18084 799 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 RPS12P25398 132 aaKnown RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 PON1P27169 355 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 PPARDQ03181 441 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 NAB2Q15742 525 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 RRAGAQ7L523 313 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 PLCD4Q9BRC7 762 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 METTL14Q9HCE5 456 aaKnown RBP13.17□□□□□ -0.3
NCL-201ENST00000322723 CETN3O15182 167 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 PMM2O15305 246 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 INPP5BP32019 993 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 CYP27A1Q02318 531 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 ZNF720Q7Z2F6 126 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 SPICE1Q8N0Z3 855 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 DYDC2Q96IM9 177 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 LSM14BQ9BX40 385 aaKnown RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 GPR88Q9GZN0 384 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 MYOZ2Q9NPC6 264 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.33e-11■□□□□ 10.5
NCL-201ENST00000322723 NR3C1P04150 777 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 ARP10275 920 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 NR2F2P24468 414 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 VSNL1P62760 191 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 CKAP4Q07065 602 aaKnown RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 C10orf76Q5T2E6 689 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 LRCH2Q5VUJ6 765 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 RGL1Q9NZL6 768 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 KIF5AQ12840 1032 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 SLC30A5Q8TAD4 765 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 SENP7Q9BQF6 1050 aa13.16□□□□□ -0.3
NCL-201ENST00000322723 AJAP1Q9UKB5 411 aaPredicted RBP13.16□□□□□ -0.3
NCL-201ENST00000322723 ZSWIM8A7E2V4 1837 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 MAPK13O15264 365 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
NCL-201ENST00000322723 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■□□□□ 11.1
NCL-201ENST00000322723 SFMBT2Q5VUG0 894 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 TLR10Q9BXR5 811 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 CLSTN1O94985 981 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 MAP2K2P36507 400 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 AGO4Q9HCK5 861 aaKnown RBP13.15□□□□□ -0.3
NCL-201ENST00000322723 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
NCL-201ENST00000322723 GFPT2O94808 682 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 RNF187Q5TA31 235 aaPredicted RBP13.15□□□□□ -0.3
NCL-201ENST00000322723 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
NCL-201ENST00000322723 NELFCDQ8IXH7 590 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms