RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SELENOOQ9BVL4 669 aa24.49■■□□□ 1.51
PNKP-201ENST00000322344 FEM1BQ9UK73 627 aa24.49■■□□□ 1.51
PNKP-201ENST00000322344 FRMPD4Q14CM0 1322 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 CNTNAP1P78357 1384 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 TGFB1I1O43294 461 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 C21orf2O43822 256 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 CXCR5P32302 372 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 GYS2P54840 703 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 IFI16Q16666 785 aaKnown RBP24.48■■□□□ 1.51
PNKP-201ENST00000322344 MEI1Q5TIA1 1274 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 TCERG1LQ5VWI1 586 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 RTKN2Q8IZC4 609 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 ODF2LQ9ULJ1 636 aa24.48■■□□□ 1.51
PNKP-201ENST00000322344 SHTN1A0MZ66 631 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 ZMYND10O75800 440 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 TNFRSF8P28908 595 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 PSMC2P35998 433 aaKnown RBP24.47■■□□□ 1.51
PNKP-201ENST00000322344 PTK2Q05397 1052 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 DEFB129Q9H1M3 183 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 CHMP2AO43633 222 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 ZNF131P52739 623 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 BORCS6Q96GS4 357 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 PSMB7Q99436 277 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 PSMD1Q99460 953 aa24.47■■□□□ 1.51
PNKP-201ENST00000322344 ZMYM2Q9UBW7 1377 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 MYBL2P10244 700 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 CASP4P49662 377 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 ZNF571Q7Z3V5 609 aaPredicted RBP24.46■■□□□ 1.51
PNKP-201ENST00000322344 VPS36Q86VN1 386 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 NEK9Q8TD19 979 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 ZNF577Q9BSK1 485 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 TEKT3Q9BXF9 490 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 SIX2Q9NPC8 291 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 STIM2Q9P246 746 aa24.46■■□□□ 1.51
PNKP-201ENST00000322344 CES2O00748 559 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 CLIC2O15247 247 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 FLOT1O75955 427 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 LMAN1P49257 510 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 JAM2P57087 298 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 C8orf74Q6P047 294 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 FAM186BQ8IYM0 893 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 GCNT4Q9P109 453 aa24.45■■□□□ 1.51
PNKP-201ENST00000322344 ENOX2Q16206 610 aaKnown RBP24.45■■□□□ 1.5
PNKP-201ENST00000322344 FAM83AQ86UY5 434 aa24.45■■□□□ 1.5
PNKP-201ENST00000322344 RIT2Q99578 217 aa24.45■■□□□ 1.5
PNKP-201ENST00000322344 DMGDHQ9UI17 866 aaKnown RBP24.45■■□□□ 1.5
PNKP-201ENST00000322344 PCDHB13Q9Y5F0 798 aa24.45■■□□□ 1.5
PNKP-201ENST00000322344 ZC3H4Q9UPT8 1303 aaKnown RBP24.45■■□□□ 1.5
PNKP-201ENST00000322344 TNS1Q9HBL0 1735 aaKnown RBP24.45■■□□□ 1.5
PNKP-201ENST00000322344 SFI1A8K8P3 1242 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 SYF2O95926 243 aaKnown RBP24.44■■□□□ 1.5
PNKP-201ENST00000322344 NMT1P30419 496 aaKnown RBP24.44■■□□□ 1.5
PNKP-201ENST00000322344 MATR3P43243 847 aaKnown RBP eCLIP24.44■■□□□ 1.5
PNKP-201ENST00000322344 EPHB4P54760 987 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 KCNA1Q09470 495 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 EZH2Q15910 746 aaKnown RBP24.44■■□□□ 1.5
PNKP-201ENST00000322344 B3GNT9Q6UX72 402 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 HS2ST1Q7LGA3 356 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 LDHDQ86WU2 507 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 MTMR14Q8NCE2 650 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 GOLGA5Q8TBA6 731 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 PACSIN1Q9BY11 444 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 UNC45AQ9H3U1 944 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 DAAM1Q9Y4D1 1078 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 RAD17O75943 681 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 FERP16591 822 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 GUCY2CP25092 1073 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 CAP2P40123 477 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 EMBQ6PCB8 327 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 ZNF720Q7Z2F6 126 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 FAM178BQ8IXR5 827 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 GSPT2Q8IYD1 628 aaKnown RBP24.44■■□□□ 1.5
PNKP-201ENST00000322344 GOLGA6L1Q8N7Z2 621 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 RBM12Q9NTZ6 932 aaKnown RBP24.44■■□□□ 1.5
PNKP-201ENST00000322344 NAGPAQ9UK23 515 aa24.44■■□□□ 1.5
PNKP-201ENST00000322344 RNF40O75150 1001 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 GFPT2O94808 682 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 FTCDO95954 541 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 FMNL3Q8IVF7 1028 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 LARGE2Q8N3Y3 721 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 TTLL6Q8N841 843 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 RBM46Q8TBY0 533 aaKnown RBP24.43■■□□□ 1.5
PNKP-201ENST00000322344 HDAC7Q8WUI4 952 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 FIZ1Q96SL8 496 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 BCAS3Q9H6U6 928 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 STK32BQ9NY57 414 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 EHD2Q9NZN4 543 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 INTUQ9ULD6 942 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 NENFQ9UMX5 172 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 MYH10P35580 1976 aa24.43■■□□□ 1.5
PNKP-201ENST00000322344 MUM1L1Q5H9M0 696 aa24.42■■□□□ 1.5
PNKP-201ENST00000322344 ALKBH5Q6P6C2 394 aaKnown RBP24.42■■□□□ 1.5
PNKP-201ENST00000322344 TAF4BQ92750 862 aa24.42■■□□□ 1.5
PNKP-201ENST00000322344 MXRA8Q9BRK3 442 aa24.42■■□□□ 1.5
PNKP-201ENST00000322344 VPS33BQ9H267 617 aa24.42■■□□□ 1.5
PNKP-201ENST00000322344 VEZTQ9HBM0 779 aa24.42■■□□□ 1.5
PNKP-201ENST00000322344 SMARCAL1Q9NZC9 954 aa24.42■■□□□ 1.5
PNKP-201ENST00000322344 RBBP6Q7Z6E9 1792 aaKnown RBP24.42■■□□□ 1.5
PNKP-201ENST00000322344 ARP10275 920 aa24.42■■□□□ 1.5
PNKP-201ENST00000322344 BCRP11274 1271 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms