RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 NEK1Q96PY6 1258 aa9.54□□□□□ -0.88
SGIP1-202ENST00000320161 CDCA3Q99618 268 aaPredicted RBP9.54□□□□□ -0.88
SGIP1-202ENST00000320161 IRF2BPLQ9H1B7 796 aa9.54□□□□□ -0.88
SGIP1-202ENST00000320161 AGO3Q9H9G7 860 aaKnown RBP9.54□□□□□ -0.88
SGIP1-202ENST00000320161 RC3H2Q9HBD1 1191 aaKnown RBP9.54□□□□□ -0.88
SGIP1-202ENST00000320161 TLR9Q9NR96 1032 aa9.54□□□□□ -0.88
SGIP1-202ENST00000320161 KCNH7Q9NS40 1196 aa9.54□□□□□ -0.88
SGIP1-202ENST00000320161 PUF60Q9UHX1 559 aaKnown RBP9.54□□□□□ -0.88
SGIP1-202ENST00000320161 ZNF318Q5VUA4 2279 aa9.54□□□□□ -0.88
SGIP1-202ENST00000320161 C5orf42Q9H799 3197 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 COL1A2P08123 1366 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 hCG_1642624A0A1W2PR95 340 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 TMEM221A6NGB7 291 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 TBKBP1A7MCY6 615 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 M0R296 226 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 LINC01565O15544 149 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 HOXA2O43364 376 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 HBP1O60381 514 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 KLRC1P26715 233 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 GTF2F1P35269 517 aaKnown RBP eCLIP9.53□□□□□ -0.88
SGIP1-202ENST00000320161 PTPN5P54829 565 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 COASYQ13057 564 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 MIS18BP1Q6P0N0 1132 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 PDXDC2PQ6P474 469 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 MTHFD1LQ6UB35 978 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 MAMSTRQ6ZN01 415 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 TMTC3Q6ZXV5 915 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 TMEM87AQ8NBN3 555 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 SPPL3Q8TCT6 385 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 TRAPPC12Q8WVT3 735 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 ATP6V0A4Q9HBG4 840 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 RIC8AQ9NPQ8 531 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 TMEM260Q9NX78 707 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
SGIP1-202ENST00000320161 CEP131Q9UPN4 1083 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 TELO2Q9Y4R8 837 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 KDM3AQ9Y4C1 1321 aa9.53□□□□□ -0.88
SGIP1-202ENST00000320161 DDX39AO00148 427 aaKnown RBP9.52□□□□□ -0.89
SGIP1-202ENST00000320161 EYA4O95677 639 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 LAG3P18627 525 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 PDE4AP27815 886 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 TMOD1P28289 359 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 KRT17Q04695 432 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 RTN1Q16799 776 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 TMEM266Q2M3C6 531 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ZNF484Q5JVG2 852 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 MCTP2Q6DN12 878 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 TRIM67Q6ZTA4 783 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 SLC24A5Q71RS6 500 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 RAB11FIP4Q86YS3 637 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ZNF710Q8N1W2 664 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 METTL13Q8N6R0 699 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ATP8B4Q8TF62 1192 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 CCDC12Q8WUD4 166 aaPredicted RBP9.52□□□□□ -0.89
SGIP1-202ENST00000320161 LINC01599Q8WXQ3 324 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 RPGRIP1Q96KN7 1286 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 SCLT1Q96NL6 688 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 MAP7D2Q96T17 732 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ADAM2Q99965 735 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 PHF7Q9BWX1 381 aaPredicted RBP9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ANO3Q9BYT9 981 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 AGO4Q9HCK5 861 aaKnown RBP9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ANO2Q9NQ90 1003 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ENTPD7Q9NQZ7 604 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 ZNF302Q9NR11 478 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
SGIP1-202ENST00000320161 USP15Q9Y4E8 981 aaPredicted RBP9.52□□□□□ -0.89
SGIP1-202ENST00000320161 SAMM50Q9Y512 469 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 TAF6LQ9Y6J9 622 aa9.52□□□□□ -0.89
SGIP1-202ENST00000320161 TECTAO75443 2155 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 MYO10Q9HD67 2058 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 CCDC196A0A1B0GTZ2 297 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 SMCO2A6NFE2 343 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 SLC27A2O14975 620 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 ZBTB43O43298 467 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 FGF18O76093 207 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 LINC00271P0C7V0 271 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 ZSCAN20P17040 1043 aaPredicted RBP9.51□□□□□ -0.89
SGIP1-202ENST00000320161 CA8P35219 290 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 PPM1AP35813 382 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 ZXDAP98168 799 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 SETQ01105 290 aaPredicted RBP9.51□□□□□ -0.89
SGIP1-202ENST00000320161 CREB3L3Q68CJ9 461 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 NIPA1Q7RTP0 329 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 BMP8AQ7Z5Y6 402 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 ADGRD2Q7Z7M1 963 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 RTN4RL1Q86UN2 441 aaPredicted RBP9.51□□□□□ -0.89
SGIP1-202ENST00000320161 PLA2G4DQ86XP0 818 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 ZBTB10Q96DT7 871 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 MSLNLQ96KJ4 702 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 RGS18Q9NS28 235 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 TBC1D22BQ9NU19 505 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 NR2E1Q9Y466 385 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 KMT2EQ8IZD2 1858 aa9.51□□□□□ -0.89
SGIP1-202ENST00000320161 TRIOO75962 3097 aa9.5□□□□□ -0.89
SGIP1-202ENST00000320161 GOLGA8AA7E2F4 631 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms