RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 PRDM10Q9NQV6 1147 aa15.15■□□□□ 0.02
PRPF18-201ENST00000320054 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
PRPF18-201ENST00000320054 KIAA1468Q9P260 1216 aa15.15■□□□□ 0.02
PRPF18-201ENST00000320054 SEPT9Q9UHD8 586 aaPredicted RBP15.15■□□□□ 0.02
PRPF18-201ENST00000320054 TRIP12Q14669 1992 aaPredicted RBP15.15■□□□□ 0.02
PRPF18-201ENST00000320054 COL1A2P08123 1366 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 MYMKA6NI61 221 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 SMC2O95347 1197 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 PGK1P00558 417 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 ZNF286BP0CG31 522 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 BEX3Q00994 111 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 TARBP2Q15633 366 aaKnown RBP15.14■□□□□ 0.01
PRPF18-201ENST00000320054 ARSHQ5FYA8 562 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 GNASQ5JWF2 1037 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 NT5DC1Q5TFE4 455 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 RINT1Q6NUQ1 792 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 C1orf186Q6ZWK4 172 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 RNF180Q86T96 592 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 PCSK9Q8NBP7 692 aaKnown RBP15.14■□□□□ 0.01
PRPF18-201ENST00000320054 CCDC43Q96MW1 224 aaKnown RBP15.14■□□□□ 0.01
PRPF18-201ENST00000320054 TIPINQ9BVW5 301 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 UNC93B1Q9H1C4 597 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 PAK6Q9NQU5 681 aaPredicted RBP15.14■□□□□ 0.01
PRPF18-201ENST00000320054 CYP26B1Q9NR63 512 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 TUBE1Q9UJT0 475 aa15.14■□□□□ 0.01
PRPF18-201ENST00000320054 PVALEFA0A1B0GWK0 134 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 TMEM150BA6NC51 233 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 MYADML2A6NDP7 307 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 HAS3O00219 553 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 MYL3P08590 195 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 CCL5P13501 91 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 GUCY2CP25092 1073 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 RFC5P40937 340 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 SARSP49591 514 aaKnown RBP15.13■□□□□ 0.01
PRPF18-201ENST00000320054 NPEPPSP55786 919 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 IRX5P78411 483 aaPredicted RBP15.13■□□□□ 0.01
PRPF18-201ENST00000320054 PURAQ00577 322 aaKnown RBP15.13■□□□□ 0.01
PRPF18-201ENST00000320054 CUL4BQ13620 913 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 ZSCAN23Q3MJ62 389 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 ZNF484Q5JVG2 852 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 PLA2G4FQ68DD2 849 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 CCSAPQ6IQ19 270 aaPredicted RBP15.13■□□□□ 0.01
PRPF18-201ENST00000320054 PADI6Q6TGC4 694 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 EXOC8Q8IYI6 725 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 DDX12PQ92771 950 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 KAT2BQ92831 832 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 SMARCE1Q969G3 411 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 ARMC5Q96C12 935 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 CEP170P1Q96L14 293 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 GSDMAQ96QA5 445 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 CEP89Q96ST8 783 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 KATNAL1Q9BW62 490 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 BLZF1Q9H2G9 400 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 RNPEPQ9H4A4 650 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 PCDHA5Q9Y5H7 936 aa15.13■□□□□ 0.01
PRPF18-201ENST00000320054 DGAT1O75907 488 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 MARK3P27448 753 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 PSEN2P49810 448 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 GIT2Q14161 759 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 KCNB1Q14721 858 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 MTERF2Q49AM1 385 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 ARRDC4Q8NCT1 418 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 ZNF333Q96JL9 665 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 TSEN34Q9BSV6 310 aaKnown RBP15.12■□□□□ 0.01
PRPF18-201ENST00000320054 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
PRPF18-201ENST00000320054 RUSC1Q9BVN2 902 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 PDLIM7Q9NR12 457 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 ODF2LQ9ULJ1 636 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 TRPC6Q9Y210 931 aa15.12■□□□□ 0.01
PRPF18-201ENST00000320054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
PRPF18-201ENST00000320054 ZBTB42B2RXF5 422 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 KLRC4O43908 158 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 CABYRO75952 493 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 RPN1P04843 607 aaKnown RBP15.11■□□□□ 0.01
PRPF18-201ENST00000320054 KRT18P05783 430 aaKnown RBP15.11■□□□□ 0.01
PRPF18-201ENST00000320054 CASP1P29466 404 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 ASIC1P78348 528 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 MFSD10Q14728 455 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 LRRC41Q15345 812 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 KCNA10Q16322 511 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 UNC13DQ70J99 1090 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 DYMQ7RTS9 669 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
PRPF18-201ENST00000320054 TRIML1Q8N9V2 468 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 CCDC47Q96A33 483 aaKnown RBP15.11■□□□□ 0.01
PRPF18-201ENST00000320054 REEP2Q9BRK0 252 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 GTPBP4Q9BZE4 634 aaKnown RBP15.11■□□□□ 0.01
PRPF18-201ENST00000320054 DHX33Q9H6R0 707 aaKnown RBP15.11■□□□□ 0.01
PRPF18-201ENST00000320054 RMND1Q9NWS8 449 aa15.11■□□□□ 0.01
PRPF18-201ENST00000320054 FRMD3A2A2Y4 597 aa15.1■□□□□ 0.01
PRPF18-201ENST00000320054 MOXD2PA6NHM9 499 aa15.1■□□□□ 0.01
PRPF18-201ENST00000320054 RRN3P2A6NIE6 340 aa15.1■□□□□ 0.01
PRPF18-201ENST00000320054 GAS2O43903 313 aaKnown RBP15.1■□□□□ 0.01
PRPF18-201ENST00000320054 USO1O60763 962 aaKnown RBP15.1■□□□□ 0.01
PRPF18-201ENST00000320054 MAFO75444 373 aaPredicted RBP15.1■□□□□ 0.01
PRPF18-201ENST00000320054 ASGR1P07306 291 aa15.1■□□□□ 0.01
PRPF18-201ENST00000320054 INSRRP14616 1297 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms