RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 RUSC1Q9BVN2 902 aa30.49■■■□□ 2.47
CTDNEP1-201ENST00000318988 HMX1Q9NP08 348 aaPredicted RBP30.49■■■□□ 2.47
CTDNEP1-201ENST00000318988 EXOC1Q9NV70 894 aa30.49■■■□□ 2.47
CTDNEP1-201ENST00000318988 MAN1B1Q9UKM7 699 aa30.49■■■□□ 2.47
CTDNEP1-201ENST00000318988 TRPC6Q9Y210 931 aa30.49■■■□□ 2.47
CTDNEP1-201ENST00000318988 PVALEFA0A1B0GWK0 134 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 ZNF286BP0CG31 522 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 CTCFP49711 727 aaPredicted RBP30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 NPEPPSP55786 919 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 GJA9P57773 515 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 RAD51AP2Q09MP3 1159 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 STX1AQ16623 288 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 MTERF2Q49AM1 385 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 ARSHQ5FYA8 562 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 ATP8B4Q8TF62 1192 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 NIFKQ9BYG3 293 aaKnown RBP30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 CYP26B1Q9NR63 512 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 ANO10Q9NW15 660 aa30.48■■■□□ 2.47
CTDNEP1-201ENST00000318988 ZEB2O60315 1214 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 TBCAO75347 108 aaKnown RBP30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 ISM2Q6H9L7 571 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 C1orf186Q6ZWK4 172 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 UNC13DQ70J99 1090 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 SH2D3AQ9BRG2 576 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 TSPY26PQ9H489 355 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 XPNPEP3Q9NQH7 507 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 DDX20Q9UHI6 824 aaKnown RBP30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 NPHP3-ACAD11A0A0J9YXS1 232 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 H3BRB1 525 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 MSCO60682 206 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 KPNA6O60684 536 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 USO1O60763 962 aaKnown RBP30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 HSPA1AP0DMV8 641 aaKnown RBP30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 HSPA1BP0DMV9 641 aaKnown RBP30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 NLRP12P59046 1061 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 KCNB1Q14721 858 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 PLCB4Q15147 1175 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 KMT5BQ4FZB7 885 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 DNAJC19Q96DA6 116 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 ZHX3Q9H4I2 956 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 TUT1Q9H6E5 874 aaKnown RBP30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 PANK4Q9NVE7 773 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 PPME1Q9Y570 386 aa30.47■■■□□ 2.47
CTDNEP1-201ENST00000318988 SYNRGQ9UMZ2 1314 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 HBP1O60381 514 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 MYL3P08590 195 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 BEX3Q00994 111 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 SLC9C1Q4G0N8 1177 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 REEP2Q9BRK0 252 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 C16orf70Q9BSU1 422 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 TIPINQ9BVW5 301 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 GTPBP4Q9BZE4 634 aaKnown RBP30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 UPF3AQ9H1J1 476 aaKnown RBP30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 MYH9P35579 1960 aaKnown RBP30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 LOXHD1Q8IVV2 1947 aa30.46■■■□□ 2.47
CTDNEP1-201ENST00000318988 CEP350Q5VT06 3117 aa30.45■■■□□ 2.47
CTDNEP1-201ENST00000318988 GUCY2CP25092 1073 aa30.45■■■□□ 2.47
CTDNEP1-201ENST00000318988 GIT2Q14161 759 aa30.45■■■□□ 2.47
CTDNEP1-201ENST00000318988 GNASQ5JWF2 1037 aa30.45■■■□□ 2.47
CTDNEP1-201ENST00000318988 CTU1Q7Z7A3 348 aaKnown RBP30.45■■■□□ 2.47
CTDNEP1-201ENST00000318988 SH3TC2Q8TF17 1288 aa30.45■■■□□ 2.47
CTDNEP1-201ENST00000318988 KLRC4O43908 158 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 DGAT1O75907 488 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 FAM13AO94988 1023 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 PGK1P00558 417 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 LBX1P52954 281 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 CACNB1Q02641 598 aaPredicted RBP30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 MORC3Q14149 939 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 FUCA2Q9BTY2 467 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 ODF2LQ9ULJ1 636 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 COL4A3BPQ9Y5P4 624 aa30.44■■■□□ 2.46
CTDNEP1-201ENST00000318988 POLGP54098 1239 aaPredicted RBP30.43■■■□□ 2.46
CTDNEP1-201ENST00000318988 EXOC8Q8IYI6 725 aa30.43■■■□□ 2.46
CTDNEP1-201ENST00000318988 RHOBTB3O94955 611 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 MYCNP04198 464 aaPredicted RBP30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 RFC5P40937 340 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 MAEAQ7L5Y9 396 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 MCPH1Q8NEM0 835 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 SLC7A3Q8WY07 619 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 KATNAL1Q9BW62 490 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 RNPEPQ9H4A4 650 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 ATP6V0A4Q9HBG4 840 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 DACH1Q9UI36 760 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 WDR81Q562E7 1941 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 GAP43P17677 238 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 CHMP4BP1P59074 171 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 COASYQ13057 564 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 PSMD2Q13200 908 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 HERC4Q5GLZ8 1057 aaPredicted RBP30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 DRC1Q96MC2 740 aa30.42■■■□□ 2.46
CTDNEP1-201ENST00000318988 HIP1RO75146 1068 aa30.41■■■□□ 2.46
CTDNEP1-201ENST00000318988 NKX3-2P78367 333 aa30.41■■■□□ 2.46
CTDNEP1-201ENST00000318988 IRX5P78411 483 aaPredicted RBP30.41■■■□□ 2.46
CTDNEP1-201ENST00000318988 TBC1D8BQ0IIM8 1120 aa30.41■■■□□ 2.46
CTDNEP1-201ENST00000318988 ZNF484Q5JVG2 852 aa30.41■■■□□ 2.46
CTDNEP1-201ENST00000318988 ZNF658Q5TYW1 1059 aaPredicted RBP30.41■■■□□ 2.46
CTDNEP1-201ENST00000318988 NAT10Q9H0A0 1025 aaKnown RBP30.41■■■□□ 2.46
CTDNEP1-201ENST00000318988 F2P00734 622 aa30.4■■■□□ 2.46
CTDNEP1-201ENST00000318988 TARBP2Q15633 366 aaKnown RBP30.4■■■□□ 2.46
CTDNEP1-201ENST00000318988 ANO6Q4KMQ2 910 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms