RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 AGPSO00116 658 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 CLIC2O15247 247 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 CYTH3O43739 400 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 SLC37A4O43826 429 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 GYPCP04921 128 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 PSMC6P62333 389 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 RRAGBQ5VZM2 374 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 APOA5Q6Q788 366 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 PPP1R14BQ96C90 147 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 SH2B1Q9NRF2 756 aaPredicted RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 TMOD4Q9NZQ9 345 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 RABL2AQ9UBK7 228 aaPredicted RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 SERPINA10Q9UK55 444 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 MTUS1Q9ULD2 1270 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 C2orf71A6NGG8 1288 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 PPP1R11O60927 126 aaPredicted RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 SYF2O95926 243 aaKnown RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 RAB6CQ53S08 254 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 CC2D2BQ6DHV5 1058 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 DHX32Q7L7V1 743 aaKnown RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 HACE1Q8IYU2 909 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 SIX5Q8N196 739 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 KBTBD3Q8NAB2 608 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 INTS4Q96HW7 963 aaKnown RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 DCAF5Q96JK2 942 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 ALS2CR12Q96Q35 445 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 RAB6CQ9H0N0 254 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 KDM4CQ9H3R0 1056 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 KIAA1468Q9P260 1216 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 CSPG5O95196 566 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 PAX7P23759 505 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 HOXA13P31271 388 aaPredicted RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 ADD2P35612 726 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 MTMR2Q13614 643 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 ZBTB41Q5SVQ8 909 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 MRPS27Q92552 414 aaKnown RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 HOMER2Q9NSB8 354 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 MCM9Q9NXL9 1143 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 STIM2Q9P246 746 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 FBXO9Q9UK97 447 aaPredicted RBP3.93□□□□□ -1.78
GEN1-201ENST00000317402 STX8Q9UNK0 236 aa3.93□□□□□ -1.78
GEN1-201ENST00000317402 PIK3R2O00459 728 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 FERP16591 822 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 ABL2P42684 1182 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 NLRP12P59046 1061 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 SLC44A4Q53GD3 710 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 CC2D1AQ6P1N0 951 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 CNNM3Q8NE01 707 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 PRCCQ92733 491 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 KLHL11Q9NVR0 708 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TAS2R14Q9NYV8 317 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 DMGDHQ9UI17 866 aaKnown RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 USP21Q9UK80 565 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 RIC1Q4ADV7 1423 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TBCAO75347 108 aaKnown RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 MYCP01106 439 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 TMOD1P28289 359 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 RNF10Q8N5U6 811 aaKnown RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 EFCAB3Q8N7B9 438 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 MSANTD4Q8NCY6 345 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 IL17RAQ96F46 866 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 XAB2Q9HCS7 855 aaKnown RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 SEPT10Q9P0V9 454 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 SAMD15Q9P1V8 674 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TCRBV7S2A1N4TA0A589 114 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 PABPN1LA6NDY0 278 aaKnown RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 TSPY2A6NKD2 308 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 E9PMD0 336 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 CASQ2O14958 399 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 LSM1O15116 133 aaKnown RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 SERPINI2O75830 405 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TSPY3P0CV98 308 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TSPY8P0CW00 308 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 ATP5JP18859 108 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 SYKP43405 635 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 CCT5P48643 541 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 SNX16P57768 344 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TSPY1Q01534 308 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 KIF5AQ12840 1032 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TTMPQ5BVD1 217 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 KLHL7Q8IXQ5 586 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TRIM58Q8NG06 486 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 FAM207AQ9NSI2 230 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 RCOR1Q9UKL0 485 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 MINPP1Q9UNW1 487 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 DAAM1Q9Y4D1 1078 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 NUMBLQ9Y6R0 609 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TMEM110-MUSTN1A8MSY1 372 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 CHUKO15111 745 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 ATXN8OSP0DMR3 200 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TXKP42681 527 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 AMPD3Q01432 767 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 TRIP13Q15645 432 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 LMBRD2Q68DH5 695 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 FAM84BQ96KN1 310 aaPredicted RBP3.92□□□□□ -1.78
GEN1-201ENST00000317402 ITGB1BP2Q9UKP3 347 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 E2F8A0AVK6 867 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 ORC1Q13415 861 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 SETDB1Q15047 1291 aa3.92□□□□□ -1.78
GEN1-201ENST00000317402 ZFYVE27Q5T4F4 411 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms