RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 KRT12Q99456 494 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 FUCA2Q9BTY2 467 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MTO1Q9Y2Z2 717 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 PCDHA5Q9Y5H7 936 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 DIAPH2O60879 1101 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 APOA1P02647 267 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 FESP07332 822 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 PLA2G4AP47712 749 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 POLE2P56282 527 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 RPL26P61254 145 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SPATA21Q7Z572 469 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 REXO1Q8N1G1 1221 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SH2D4AQ9H788 454 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SLC40A1Q9NP59 571 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 DNAJC17Q9NVM6 304 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 CNOT7Q9UIV1 285 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MKL2Q9ULH7 1088 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 OVOS2A0A0J9YW53 1432 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 OVOS2Q6IE36 1432 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 RICTORQ6R327 1708 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 C16orf96A6NNT2 1141 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 GOLGA8MH3BSY2 632 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 TBC1D12O60347 775 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 FKBP6O75344 327 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 KRT38O76015 456 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MYBL1P10243 752 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 CCNE1P24864 410 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 STX17P56962 302 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 GSDMBQ8TAX9 411 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ZFAND2BQ8WV99 257 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ATXN2LQ8WWM7 1075 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 BRIP1Q9BX63 1249 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 WWP1Q9H0M0 922 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 EPC1Q9H2F5 836 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC134Q9H6E4 229 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ANKFY1Q9P2R3 1169 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 DKK3Q9UBP4 350 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 KIF1AQ12756 1690 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ABCC3O15438 1527 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SNAPC5O75971 98 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 LARGE1O95461 756 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SERPINB2P05120 415 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 GARSP41250 739 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 DEFA1P59665 94 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 DEFA3P59666 94 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 RBL2Q08999 1139 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 GNPTABQ3T906 1256 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 WDR44Q5JSH3 913 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SMYD5Q6GMV2 418 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 TTC13Q8NBP0 860 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 STKLD1Q8NE28 680 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SPATA4Q8NEY3 305 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SCFD1Q8WVM8 642 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 P2RX5Q93086 422 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MAGED4Q96JG8 741 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 PSMB7Q99436 277 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ISCUQ9H1K1 167 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 EYA2O00167 538 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MMP1P03956 469 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 PDIA3P30101 505 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 NSFP46459 744 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 KIF23Q02241 960 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 LBRQ14739 615 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ARMCX5Q6P1M9 558 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 CYFIP1Q7L576 1253 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 COL23A1Q86Y22 540 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MAB21L3Q8N8X9 362 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SPATA5Q8NB90 893 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 NSMCE1Q8WV22 266 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 NAF1Q96HR8 494 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 VPS50Q96JG6 964 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC138Q96M89 665 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MAK16Q9BXY0 300 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ZHX3Q9H4I2 956 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 SAR1AQ9NR31 198 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 ZBTB12Q9Y330 459 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 A0A0D9SFI3 127 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 HLA-DOAP06340 250 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 DCTN2Q13561 401 aaKnown RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 SPDYAQ5MJ70 313 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 FBXO31Q5XUX0 539 aaPredicted RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 TYW1BQ6NUM6 668 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 PPP1R18Q6NYC8 613 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 B4GALNT2Q8NHY0 566 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 SNRKQ9NRH2 765 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 CCDC87Q9NVE4 849 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 ARPP21Q9UBL0 812 aaPredicted RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 ZFP69BQ9UJL9 534 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 PCDHB13Q9Y5F0 798 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 ATP5J2-PTCD1G3V325 749 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 PTCD1O75127 700 aaKnown RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 ESRRAP11474 423 aaPredicted RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 KCNA3P22001 575 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 NT5DC1Q5TFE4 455 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 ZFP1Q6P2D0 407 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 RRAGAQ7L523 313 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 CCDC25Q86WR0 208 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 SYT2Q8N9I0 419 aaPredicted RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 RBBP8NLQ8NC74 664 aaPredicted RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 SEC16BQ96JE7 1060 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms