RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SCUBE1Q8IWY4 988 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 CACTIN-AS1Q8N1I8 211 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 C4orf32Q8N8J7 132 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 SLC43A3Q8NBI5 491 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 EDC3Q96F86 508 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 DHTKD1Q96HY7 919 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 HINFPQ9BQA5 517 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 PFDN4Q9NQP4 134 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 AGAP1Q9UPQ3 857 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 IRS2Q9Y4H2 1338 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 LGALS16A8MUM7 142 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 GSG1L2A8MUP6 293 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 IGF2BP3O00425 579 aaKnown RBP eCLIP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 RHOBTB3O94955 611 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ASLP04424 464 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ATP1A1P05023 1023 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ITGA2BP08514 1039 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 TCF7P36402 384 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 MSH2P43246 934 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 PEX5P50542 639 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 MARSP56192 900 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 NCALDP61601 193 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 PTK7Q13308 1070 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 CAMK2BQ13554 666 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ITIH4Q14624 930 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 DDB1Q16531 1140 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 FXNQ16595 210 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 LRRC24Q50LG9 513 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 FAM133BQ5BKY9 247 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 POTEEQ6S8J3 1075 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 OTUD6AQ7L8S5 288 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 PTF1AQ7RTS3 328 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 WDR75Q8IWA0 830 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 STKLD1Q8NE28 680 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 TMEM174Q8WUU8 243 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 RAPGEF5Q92565 580 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 FAM136AQ96C01 138 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 CATSPER2Q96P56 530 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 NAP1L3Q99457 506 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 SIKE1Q9BRV8 207 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 EIF2AQ9BY44 585 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 NCOA5Q9HCD5 579 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ABHD10Q9NUJ1 306 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 DMGDHQ9UI17 866 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 NFE2L3Q9Y4A8 694 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 AFF2P51816 1311 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ESYT2A0FGR8 921 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 TMEM110-MUSTN1A8MSY1 372 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PHF20L1A8MW92 1017 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 F8W031 263 aaPredicted RBP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 WDR46O15213 610 aaKnown RBP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 BIRC5O15392 142 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 KRT16P08779 473 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 SPATA31D3P0C874 917 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 MYL6BP14649 208 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PDE6CP51160 858 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PMS2P54278 862 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 GEMIN4P57678 1058 aaKnown RBP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 FMR1Q06787 632 aaKnown RBP eCLIP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 IFIT5Q13325 482 aaKnown RBP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 MAP7Q14244 749 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 SPATA31D4Q6ZUB0 917 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 DAAM2Q86T65 1068 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PPFIBP1Q86W92 1011 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 IFNL3Q8IZI9 196 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 UCMAQ8WVF2 138 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 ATP6V0A1Q93050 837 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 AIDAQ96BJ3 306 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PAGE5Q96GU1 130 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 SPATA16Q9BXB7 569 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 ETNK2Q9NVF9 386 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 QPCTLQ9NXS2 382 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PDP2Q9P2J9 529 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PRELID1Q9Y255 219 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 MYPNQ86TC9 1320 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 GYPCP04921 128 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 SRGNP10124 158 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 IL2RBP14784 551 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 KRT9P35527 623 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 CCNFP41002 786 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 CACNA2D1P54289 1103 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 RAD23BP54727 409 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 HPCAP84074 193 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 RTN1Q16799 776 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 SLC7A5P1Q8MH63 180 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 DDX54Q8TDD1 881 aaKnown RBP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 ATP8B4Q8TF62 1192 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 DNAJC9Q8WXX5 260 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 MAK16Q9BXY0 300 aaKnown RBP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 NACAP1Q9BZK3 213 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 PPP1R12CQ9BZL4 782 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 MIS12Q9H081 205 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 ARHGEF38Q9NXL2 777 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 CTTNBP2NLQ9P2B4 639 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 INTUQ9ULD6 942 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 ZMYND8Q9ULU4 1186 aaPredicted RBP7.2□□□□□ -1.26
ZNF540-201ENST00000316433 CNTNAP5Q8WYK1 1306 aa7.2□□□□□ -1.26
ZNF540-201ENST00000316433 GRID2IPA4D2P6 1211 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 TRIM75PA6NK02 468 aa7.19□□□□□ -1.26
ZNF540-201ENST00000316433 PDE2AO00408 941 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms