RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CIITAP33076 1130 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 ARHGAP25P42331 645 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 MMP14P50281 582 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 C2orf54Q08AI8 447 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 TKFCQ3LXA3 575 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 HSP90B2PQ58FF3 399 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 SECISBP2LQ93073 1101 aaKnown RBP8.37□□□□□ -1.07
TRIM55-202ENST00000315962 DCPSQ96C86 337 aaKnown RBP8.37□□□□□ -1.07
TRIM55-202ENST00000315962 MBOAT7Q96N66 472 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 MXRA8Q9BRK3 442 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 KIFC3Q9BVG8 833 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 NDST4Q9H3R1 872 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 THAP9Q9H5L6 903 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 L1RE1Q9UN81 338 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 REXO2Q9Y3B8 237 aaKnown RBP8.37□□□□□ -1.07
TRIM55-202ENST00000315962 USO1O60763 962 aaKnown RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 TBCAO75347 108 aaKnown RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ACTN1P12814 892 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CXCR5P32302 372 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 PGM5Q15124 567 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 MIER3Q7Z3K6 550 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ANKRD13CQ8N6S4 541 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 SYT2Q8N9I0 419 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ZNF507Q8TCN5 953 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 TCEAL9Q9UHQ7 104 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 PCDHA2Q9Y5H9 948 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 KDM3AQ9Y4C1 1321 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 RNF40O75150 1001 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 TUBB4AP04350 444 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 EEF1GP26641 437 aaKnown RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 SPAG1Q07617 926 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ORC2Q13416 577 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 BRD3Q15059 726 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 GPR162Q16538 588 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ODR4Q5SWX8 454 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 LRRC55Q6ZSA7 311 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 GUF1Q8N442 669 aaKnown RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 GOLGA5Q8TBA6 731 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CAGE1Q8TC20 777 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 EXOC4Q96A65 974 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 FAM84AQ96KN4 292 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 PANX2Q96RD6 677 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 PCIF1Q9H4Z3 704 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 MAGEF1Q9HAY2 307 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 TMOD4Q9NZQ9 345 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 BCCIPQ9P287 314 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 MYO6Q9UM54 1294 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CLEC11AQ9Y240 323 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 HTTP42858 3142 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CCNE2O96020 404 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 PGK2P07205 417 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CYP3A4P08684 503 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CYP2J2P51589 502 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 HSD17B4P51659 736 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 SLC7A5Q01650 507 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 EHHADHQ08426 723 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 VWA3BQ502W6 1294 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CCDC122Q5T0U0 273 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 WDR59Q6PJI9 974 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 SEPT14Q6ZU15 432 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 RRAGAQ7L523 313 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 CEP112Q8N8E3 955 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ZSWIM2Q8NEG5 633 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 SLC5A5Q92911 643 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 LACRTQ9GZZ8 138 aa8.36□□□□□ -1.07
TRIM55-202ENST00000315962 ZNF214Q9UL59 606 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 GREB1LQ9C091 1923 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-202ENST00000315962 DHX15O43143 795 aaKnown RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 LRRN2O75325 713 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 FAM13AO94988 1023 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 NR3C2P08235 984 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 FKBP3Q00688 224 aaKnown RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 PTPROQ16827 1216 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 LRRC31Q6UY01 552 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 PACS2Q86VP3 889 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 NCAPG2Q86XI2 1143 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 APOBEC3FQ8IUX4 373 aaKnown RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 CNGA4Q8IV77 575 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 ANKRD35Q8N283 1001 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 HDAC7Q8WUI4 952 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 NAP1L4Q99733 375 aaKnown RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 PDCD2LQ9BRP1 358 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 TEKT3Q9BXF9 490 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 A1CFQ9NQ94 594 aaKnown RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 PDE2AO00408 941 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 TBX3O15119 743 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 ERLIN1O75477 346 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 AKAP3O75969 853 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 IBSPP21815 317 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 DNM2P50570 870 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-202ENST00000315962 OR8K1Q8NGG5 319 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 TSG101Q99816 390 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 KCTD10Q9H3F6 313 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 PXMP2Q9NR77 195 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 AFG3L2Q9Y4W6 797 aa8.35□□□□□ -1.07
TRIM55-202ENST00000315962 SNCAIPQ9Y6H5 919 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms