RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 MAPK13O15264 365 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 EIF3HO15372 352 aaKnown RBP eCLIP8.66□□□□□ -1.02
CNOT4-201ENST00000315544 TUBBP07437 444 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 NUDT17P0C025 328 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 RPA1P27694 616 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 CSRP3P50461 194 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 TTBK2Q6IQ55 1244 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 SLC39A4Q6P5W5 647 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 BICDL1Q6ZP65 573 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 TAS1R3Q7RTX0 852 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 WDR66Q8TBY9 1149 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 NACAP1Q9BZK3 213 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 VPS16Q9H269 839 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 RMND1Q9NWS8 449 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 NYAP2Q9P242 653 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 BECN2A8MW95 431 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 MYO1FO00160 1098 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 ABLIM1O14639 778 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 IGHMBP2P38935 993 aaKnown RBP8.66□□□□□ -1.02
CNOT4-201ENST00000315544 ZNF569Q5MCW4 686 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 APOBEC3FQ8IUX4 373 aaKnown RBP8.66□□□□□ -1.02
CNOT4-201ENST00000315544 ZIM3Q96PE6 472 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 MYO1CO00159 1063 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 USP2O75604 605 aaPredicted RBP8.65□□□□□ -1.02
CNOT4-201ENST00000315544 SLITRK3O94933 977 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 LYPLA2O95372 231 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 SERPINC1P01008 464 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 MCM6Q14566 821 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 ASPRV1Q53RT3 343 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 HDXQ7Z353 690 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 KRT25Q7Z3Z0 450 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 CLEC10AQ8IUN9 316 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 PDILTQ8N807 584 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 SLC12A4Q9UP95 1085 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 CTAGE9A4FU28 777 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 PPIP5K2O43314 1243 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 UFL1O94874 794 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 BTDP43251 543 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 GFPT1Q06210 699 aaPredicted RBP8.65□□□□□ -1.02
CNOT4-201ENST00000315544 ZNF844Q08AG5 666 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 ASRGL1Q7L266 308 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 ZNF804AQ7Z570 1209 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 FRMD5Q7Z6J6 570 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 CABP7Q86V35 215 aa8.65□□□□□ -1.02
CNOT4-201ENST00000315544 GSPT2Q8IYD1 628 aaKnown RBP8.65□□□□□ -1.02
CNOT4-201ENST00000315544 CPLX1O14810 134 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 SLC16A3O15427 465 aaKnown RBP8.65□□□□□ -1.03
CNOT4-201ENST00000315544 PTK2Q05397 1052 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 TRDNQ13061 729 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 PLS1Q14651 629 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 GPAT2Q6NUI2 795 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 MICALL2Q8IY33 904 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 JAKMIP2Q96AA8 810 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.03
CNOT4-201ENST00000315544 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 HAPLN2Q9GZV7 340 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 CNOT7Q9UIV1 285 aaKnown RBP8.65□□□□□ -1.03
CNOT4-201ENST00000315544 TBC1D30Q9Y2I9 924 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 SAR1BQ9Y6B6 198 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 STYXL1Q9Y6J8 313 aa8.65□□□□□ -1.03
CNOT4-201ENST00000315544 RNF40O75150 1001 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 TCEA3O75764 348 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 PPP1R2P41236 205 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 CYP27A1Q02318 531 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 TTC27Q6P3X3 843 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 ZSWIM2Q8NEG5 633 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 LARP4BQ92615 738 aaKnown RBP8.64□□□□□ -1.03
CNOT4-201ENST00000315544 CENPTQ96BT3 561 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 MS4A14Q96JA4 679 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 CRNKL1Q9BZJ0 848 aaKnown RBP8.64□□□□□ -1.03
CNOT4-201ENST00000315544 COL20A1Q9P218 1284 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 NPHP3-ACAD11A0A0J9YXS1 232 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 TMEM88BA6NKF7 163 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 ATG7O95352 703 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 CCNG1P51959 295 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 WNT7BP56706 349 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 CDCA5Q96FF9 252 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 SNCAIPQ9Y6H5 919 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 C3orf70A6NLC5 250 aaPredicted RBP8.64□□□□□ -1.03
CNOT4-201ENST00000315544 ZBTB5O15062 677 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 EIF3DO15371 548 aaKnown RBP eCLIP8.64□□□□□ -1.03
CNOT4-201ENST00000315544 EIF4A3P38919 411 aaKnown RBP8.64□□□□□ -1.03
CNOT4-201ENST00000315544 CARSP49589 748 aaKnown RBP8.64□□□□□ -1.03
CNOT4-201ENST00000315544 CAP1Q01518 475 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 C2orf54Q08AI8 447 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 FAM83BQ5T0W9 1011 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 EFCAB13Q8IY85 973 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 USP6NLQ92738 828 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 ZNF622Q969S3 477 aaKnown RBP eCLIP8.64□□□□□ -1.032e-6■□□□□ 10.1
CNOT4-201ENST00000315544 BTBD7Q9P203 1132 aa8.64□□□□□ -1.03
CNOT4-201ENST00000315544 MSH4O15457 936 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 RGS20O76081 388 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 URI1O94763 535 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-201ENST00000315544 EDN1P05305 212 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 QPCTQ16769 361 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 CBWD6Q4V339 395 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms