RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RARRES1P49788 294 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 TREML2Q5T2D2 321 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 MAEAQ7L5Y9 396 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 SYT17Q9BSW7 474 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 EDEM3Q9BZQ6 932 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 MYPNQ86TC9 1320 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 LSM14BQ9BX40 385 aaKnown RBP20.2■□□□□ 0.82
CCDC43-201ENST00000315286 ARHGAP20Q9P2F6 1191 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 TRIM10Q9UDY6 481 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 TFR2Q9UP52 801 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 TMEM150BA6NC51 233 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 EIF3CLB5ME19 914 aaKnown RBP20.19■□□□□ 0.82
CCDC43-201ENST00000315286 PPP1R12BO60237 982 aaPredicted RBP20.19■□□□□ 0.82
CCDC43-201ENST00000315286 YWHABP31946 246 aaKnown RBP20.19■□□□□ 0.82
CCDC43-201ENST00000315286 JAK3P52333 1124 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 KRT83P78385 493 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 KRT76Q01546 638 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 CACNA2D4Q7Z3S7 1137 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 GPRASP2Q96D09 838 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 INPP4AQ96PE3 977 aaPredicted RBP20.19■□□□□ 0.82
CCDC43-201ENST00000315286 EIF3CQ99613 913 aaKnown RBP20.19■□□□□ 0.82
CCDC43-201ENST00000315286 SH2D3AQ9BRG2 576 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 CSADQ9Y600 493 aa20.19■□□□□ 0.82
CCDC43-201ENST00000315286 WDR64B1ANS9 1081 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 RGS20O76081 388 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 APBA1Q02410 837 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 C9orf131Q5VYM1 1079 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 PDXDC1Q6P996 788 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 NLRX1Q86UT6 975 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 C4orf19Q8IY42 314 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 SLC35F6Q8N357 371 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 CCDC42Q96M95 316 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 NLRC4Q9NPP4 1024 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 OTOFQ9HC10 1997 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 PEX10O60683 326 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 SFNP31947 248 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 PSMC5P62195 406 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 STXBP4Q6ZWJ1 553 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 TRMT1LQ7Z2T5 733 aaKnown RBP20.18■□□□□ 0.82
CCDC43-201ENST00000315286 GPIHBP1Q8IV16 184 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 CARD6Q9BX69 1037 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 STRA6Q9BX79 667 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 CEP72Q9P209 647 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 PCDHB13Q9Y5F0 798 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 MRFAP1Q9Y605 127 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 WDR81Q562E7 1941 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 PAPPA2Q9BXP8 1791 aa20.18■□□□□ 0.82
CCDC43-201ENST00000315286 UBE4BO95155 1302 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 SLC16A3O15427 465 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 MAFGO15525 162 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 EPB41P11171 864 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 XRCC5P13010 732 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 CYP27A1Q02318 531 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 UTP14CQ5TAP6 766 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 HAUS4Q9H6D7 363 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 METTL14Q9HCE5 456 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 TCEAL9Q9UHQ7 104 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 GUCA1BQ9UMX6 200 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 ZNF263O14978 683 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 USO1O60763 962 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 PPP1R37O75864 691 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 AFPP02771 609 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 POLR2FP61218 127 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 NFIL3Q16649 462 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 BORCS6Q96GS4 357 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 MOV10L1Q9BXT6 1211 aaKnown RBP20.17■□□□□ 0.82
CCDC43-201ENST00000315286 MYO1AQ9UBC5 1043 aa20.17■□□□□ 0.82
CCDC43-201ENST00000315286 DOCK5Q9H7D0 1870 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 LCTP09848 1927 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 RCCD1A6NED2 376 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 BACH1O14867 736 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 IPO7O95373 1038 aaKnown RBP20.16■□□□□ 0.82
CCDC43-201ENST00000315286 KCNA2P16389 499 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 EIF4A3P38919 411 aaKnown RBP20.16■□□□□ 0.82
CCDC43-201ENST00000315286 PPP2R3AQ06190 1150 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 ELF2Q15723 593 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 DCAF17Q5H9S7 520 aaPredicted RBP20.16■□□□□ 0.82
CCDC43-201ENST00000315286 ZNF746Q6NUN9 644 aaPredicted RBP20.16■□□□□ 0.82
CCDC43-201ENST00000315286 KIAA1328Q86T90 577 aa20.16■□□□□ 0.82
CCDC43-201ENST00000315286 ERCC6LQ2NKX8 1250 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 CCDC122Q5T0U0 273 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 LBX2Q6XYB7 198 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 ZNF662Q6ZS27 426 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 SENP7Q9BQF6 1050 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 LACRTQ9GZZ8 138 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 GBP3Q9H0R5 595 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 ELP3Q9H9T3 547 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 AGPAT3Q9NRZ7 376 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 LARSQ9P2J5 1176 aaKnown RBP20.15■□□□□ 0.82
CCDC43-201ENST00000315286 PCDHA10Q9Y5I2 948 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 IRF6O14896 467 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 IREB2P48200 963 aaKnown RBP20.15■□□□□ 0.82
CCDC43-201ENST00000315286 NPEPPSP55786 919 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 TCERG1LQ5VWI1 586 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 PLA2G4FQ68DD2 849 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 MOB2Q70IA6 237 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 HS2ST1Q7LGA3 356 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 MNS1Q8NEH6 495 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 RDM1Q8NG50 284 aa20.15■□□□□ 0.82
CCDC43-201ENST00000315286 SLC35C1Q96A29 364 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms