RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RCSD1Q6JBY9 416 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 SULF1Q8IWU6 871 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 ADGRF4Q8IZF3 695 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 ACTR5Q9H9F9 607 aaPredicted RBP14.85□□□□□ -0.03
SPAST-201ENST00000315285 TLR3O15455 904 aaKnown RBP14.85□□□□□ -0.03
SPAST-201ENST00000315285 ACSL3O95573 720 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 PDE1BQ01064 536 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 NAALADL2Q58DX5 795 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 USP49Q70CQ1 688 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 XXYLT1Q8NBI6 393 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 MASTLQ96GX5 879 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 SLC5A4Q9NY91 659 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 SYNJ2BP-COX16A0A087WUM0 186 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 ESYT3A0FGR9 886 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 MMP10P09238 476 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 BASP1P80723 227 aaKnown RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 CALN1Q9BXU9 219 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 COX16Q9P0S2 106 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 TACC3Q9Y6A5 838 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 SART1O43290 800 aaKnown RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 ASNSP08243 561 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 GCLMP48507 274 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 IRX4P78413 519 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 FAM133BQ5BKY9 247 aaKnown RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 PDXDC2PQ6P474 469 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 PADI6Q6TGC4 694 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 ENGASEQ8NFI3 743 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 SENP2Q9HC62 589 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 MYO1CO00159 1063 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 RNASELQ05823 741 aaKnown RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 ADSSL1Q8N142 457 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 ZNF341Q9BYN7 854 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 EPB41L4AQ9HCS5 686 aaPredicted RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 DNAJC17Q9NVM6 304 aaKnown RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 HAUS2Q9NVX0 235 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 DIP2CQ9Y2E4 1556 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 NRXN1Q9ULB1 1477 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 K7ERI5 159 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 GARSP41250 739 aaKnown RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 NR1I3Q14994 352 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 NXNQ6DKJ4 435 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 ARHGEF1Q92888 912 aaKnown RBP14.84□□□□□ -0.03
SPAST-201ENST00000315285 CHP1Q99653 195 aa14.84□□□□□ -0.03
SPAST-201ENST00000315285 MED7O43513 233 aa14.83□□□□□ -0.03
SPAST-201ENST00000315285 E2F5Q15329 346 aa14.83□□□□□ -0.03
SPAST-201ENST00000315285 CCDC93Q567U6 631 aa14.83□□□□□ -0.03
SPAST-201ENST00000315285 KRT27Q7Z3Y8 459 aa14.83□□□□□ -0.03
SPAST-201ENST00000315285 ZBTB33Q86T24 672 aa14.83□□□□□ -0.03
SPAST-201ENST00000315285 DYDC2Q96IM9 177 aa14.83□□□□□ -0.03
SPAST-201ENST00000315285 EDEM3Q9BZQ6 932 aa14.83□□□□□ -0.03
SPAST-201ENST00000315285 ZNF277Q9NRM2 450 aaPredicted RBP14.83□□□□□ -0.03
SPAST-201ENST00000315285 ANKRD65E5RJM6 399 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 VSNL1P62760 191 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 PDXDC1Q6P996 788 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 BANK1Q8NDB2 785 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 FAM149B1Q96BN6 582 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 IFT122Q9HBG6 1241 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 AKT3Q9Y243 479 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 USP32Q8NFA0 1604 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 CASQ2O14958 399 aaPredicted RBP14.83□□□□□ -0.04
SPAST-201ENST00000315285 STAT3P40763 770 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 FXR1P51114 621 aaKnown RBP eCLIP14.83□□□□□ -0.04
SPAST-201ENST00000315285 GPC5P78333 572 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 ZNF34Q8IZ26 560 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 TC2NQ8N9U0 490 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 GDAP1Q8TB36 358 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 KCNB2Q92953 911 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 SCYL1Q96KG9 808 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 TDRD3Q9H7E2 651 aaKnown RBP14.83□□□□□ -0.04
SPAST-201ENST00000315285 CNOT8Q9UFF9 292 aaKnown RBP14.83□□□□□ -0.04
SPAST-201ENST00000315285 ANAPC7Q9UJX3 599 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 GRID2IPA4D2P6 1211 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 PODNQ7Z5L7 613 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 GBP5Q96PP8 586 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 MSTO1Q9BUK6 570 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 DDX47Q9H0S4 455 aaKnown RBP14.83□□□□□ -0.04
SPAST-201ENST00000315285 SCINQ9Y6U3 715 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 ITIH6Q6UXX5 1313 aa14.83□□□□□ -0.04
SPAST-201ENST00000315285 SAT1P21673 171 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 JAK3P52333 1124 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 MTMR1Q13613 665 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 HIBCHQ6NVY1 386 aaPredicted RBP14.82□□□□□ -0.04
SPAST-201ENST00000315285 RNF207Q6ZRF8 634 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 RASGRP2Q7LDG7 609 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 COG1Q8WTW3 980 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 DCPSQ96C86 337 aaKnown RBP14.82□□□□□ -0.04
SPAST-201ENST00000315285 HPS5Q9UPZ3 1129 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 C1orf167Q5SNV9 1468 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 F5H6K3 240 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 CPP00450 1065 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 MT-ND3P03897 115 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 AKR1B1P15121 316 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 KLRC3Q07444 240 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 EXOC8Q8IYI6 725 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 SCYL3Q8IZE3 742 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 APOL6Q9BWW8 343 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 PIK3C2BO00750 1634 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 OVOS2A0A0G2JMS6 1433 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 DRAP1Q14919 205 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms