RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TULP2O00295 520 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.23
RNF4-201ENST00000314289 TGFB1I1O43294 461 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 ZBED4O75132 1171 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 PGM5Q15124 567 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 FAM178BQ8IXR5 827 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 NACC1Q96RE7 527 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 PSMB7Q99436 277 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 PARD6BQ9BYG5 372 aa13.65□□□□□ -0.23
RNF4-201ENST00000314289 A0A1W2PQJ5 194 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 TLR2O60603 784 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 USO1O60763 962 aaKnown RBP13.64□□□□□ -0.23
RNF4-201ENST00000314289 HIP1RO75146 1068 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 SETQ01105 290 aaPredicted RBP13.64□□□□□ -0.23
RNF4-201ENST00000314289 EPHA7Q15375 998 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 SPA17Q15506 151 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 GJB7Q6PEY0 223 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 FAM133AQ8N9E0 248 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
RNF4-201ENST00000314289 GPRC5CQ9NQ84 441 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 CD2APQ9Y5K6 639 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 MYH10P35580 1976 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 DDNO94850 711 aaPredicted RBP13.64□□□□□ -0.23
RNF4-201ENST00000314289 KRT83P78385 493 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 GPS2Q13227 327 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 FIGNQ5HY92 759 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 PLA2G4FQ68DD2 849 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 PADI6Q6TGC4 694 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 MCF2L2Q86YR7 1114 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 AGO4Q9HCK5 861 aaKnown RBP13.64□□□□□ -0.23
RNF4-201ENST00000314289 CDC23Q9UJX2 597 aa13.64□□□□□ -0.23
RNF4-201ENST00000314289 EIF3CLB5ME19 914 aaKnown RBP13.63□□□□□ -0.23
RNF4-201ENST00000314289 LMAN1P49257 510 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 NPEPPSP55786 919 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 DAW1Q8N136 415 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 GPR161Q8N6U8 529 aaKnown RBP13.63□□□□□ -0.23
RNF4-201ENST00000314289 EIF3CQ99613 913 aaKnown RBP13.63□□□□□ -0.23
RNF4-201ENST00000314289 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.63□□□□□ -0.23
RNF4-201ENST00000314289 HAUS4Q9H6D7 363 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 TRAF3IP3Q9Y228 551 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 ZMYM2Q9UBW7 1377 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 ZNF185O15231 689 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 XRCC5P13010 732 aaKnown RBP13.63□□□□□ -0.23
RNF4-201ENST00000314289 SOX10P56693 466 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 CHMP4BP1P59074 171 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 EDRF1Q3B7T1 1238 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 DCAF15Q66K64 600 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 PCIF1Q9H4Z3 704 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.23
RNF4-201ENST00000314289 TYW1Q9NV66 732 aaKnown RBP13.63□□□□□ -0.23
RNF4-201ENST00000314289 GPRC5DQ9NZD1 345 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 PCDHA13Q9Y5I0 950 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 RPTORQ8N122 1335 aa13.63□□□□□ -0.23
RNF4-201ENST00000314289 KRT86O43790 486 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 CALUO43852 315 aaPredicted RBP13.62□□□□□ -0.23
RNF4-201ENST00000314289 MOCS3O95396 460 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 RHOXF2BP0C7M4 288 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 DNA2P51530 1060 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 B3GNT9Q6UX72 402 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 RHOXF2Q9BQY4 288 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 PXMP2Q9NR77 195 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 CAPN6Q9Y6Q1 641 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 PDXKO00764 312 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 BUB1O43683 1085 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 CCNE2O96020 404 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 KIF5AQ12840 1032 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 TMEM132BQ14DG7 1078 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 ZSCAN26Q16670 478 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 PCNX4Q63HM2 1172 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 ZNF720Q7Z2F6 126 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 RIT2Q99578 217 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 TCEAL9Q9UHQ7 104 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
RNF4-201ENST00000314289 SALL4Q9UJQ4 1053 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 UBIAD1Q9Y5Z9 338 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 MYH11P35749 1972 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 GNA14O95837 355 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 TRIM49P0CI25 452 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 TRIM49CP0CI26 452 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 HGSNATQ68CP4 663 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 CCDC170Q8IYT3 715 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 SYCP3Q8IZU3 236 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 AJAP1Q9UKB5 411 aaPredicted RBP13.62□□□□□ -0.23
RNF4-201ENST00000314289 MYO6Q9UM54 1294 aa13.62□□□□□ -0.23
RNF4-201ENST00000314289 FRMPD4Q14CM0 1322 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 K7ENM7 598 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 USP14P54578 494 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 NAP1L1P55209 391 aaKnown RBP13.61□□□□□ -0.23
RNF4-201ENST00000314289 SFMBT2Q5VUG0 894 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 ZSWIM2Q8NEG5 633 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 KLRG1Q96E93 195 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 CCDC43Q96MW1 224 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms