RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 FKBP15Q5T1M5 1219 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 SWSAP1Q6NVH7 229 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 CCDC51Q96ER9 411 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 TYW1Q9NV66 732 aaKnown RBP18.46■□□□□ 0.55
CLCF1-201ENST00000312438 LARSQ9P2J5 1176 aaKnown RBP18.46■□□□□ 0.55
CLCF1-201ENST00000312438 PCDHB13Q9Y5F0 798 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 GYPCP04921 128 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 NMT1P30419 496 aaKnown RBP18.46■□□□□ 0.55
CLCF1-201ENST00000312438 CASP14P31944 242 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 HOXD13P35453 343 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 MAPK7Q13164 816 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 XKR9Q5GH70 373 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 SPRYD7Q5W111 196 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 CEP135Q66GS9 1140 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.46■□□□□ 0.55
CLCF1-201ENST00000312438 BRI3BPQ8WY22 251 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 FIZ1Q96SL8 496 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 NDST4Q9H3R1 872 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 LOC102724159A0A0B4J2E5 919 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 ARHGAP6O43182 974 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 ATG7O95352 703 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 PGK2P07205 417 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 MAPTP10636 758 aaKnown RBP18.45■□□□□ 0.54
CLCF1-201ENST00000312438 RPL13P26373 211 aaKnown RBP18.45■□□□□ 0.54
CLCF1-201ENST00000312438 GCLCP48506 637 aaPredicted RBP18.45■□□□□ 0.54
CLCF1-201ENST00000312438 MARSP56192 900 aaKnown RBP18.45■□□□□ 0.54
CLCF1-201ENST00000312438 MKRN3Q13064 507 aaKnown RBP18.45■□□□□ 0.54
CLCF1-201ENST00000312438 NEDD9Q14511 834 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 PWP2Q15269 919 aaKnown RBP18.45■□□□□ 0.54
CLCF1-201ENST00000312438 UTP14CQ5TAP6 766 aaKnown RBP18.45■□□□□ 0.54
CLCF1-201ENST00000312438 WDR78Q5VTH9 848 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 CYFIP1Q7L576 1253 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 TMEM139Q8IV31 216 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 DAW1Q8N136 415 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 NUP58Q9BVL2 599 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 UBE4BO95155 1302 aa18.45■□□□□ 0.54
CLCF1-201ENST00000312438 BACH1O14867 736 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 MFAP3LO75121 409 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 CCDC40Q4G0X9 1142 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 KCNV1Q6PIU1 500 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 ANO5Q75V66 913 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 RETREG2Q8NC44 543 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 DRC1Q96MC2 740 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 ERGIC2Q96RQ1 377 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 NAA15Q9BXJ9 866 aaKnown RBP18.44■□□□□ 0.54
CLCF1-201ENST00000312438 USO1O60763 962 aaKnown RBP18.44■□□□□ 0.54
CLCF1-201ENST00000312438 SUPT20HL2P0C7V6 817 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 NR2F2P24468 414 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 FXR1P51114 621 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLCF1-201ENST00000312438 SP4Q02446 784 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
CLCF1-201ENST00000312438 CST9Q5W186 159 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 MAEAQ7L5Y9 396 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 CCAR2Q8N163 923 aaKnown RBP18.44■□□□□ 0.54
CLCF1-201ENST00000312438 NMRK2Q9NPI5 230 aa18.44■□□□□ 0.54
CLCF1-201ENST00000312438 ZNF862O60290 1169 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 STBD1O95210 358 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 PLS3P13797 630 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 NPEPPSP55786 919 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 ALCAMQ13740 583 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 ZC2HC1CQ53FD0 456 aaPredicted RBP18.43■□□□□ 0.54
CLCF1-201ENST00000312438 E4F1Q66K89 784 aaPredicted RBP18.43■□□□□ 0.54
CLCF1-201ENST00000312438 TRMT1LQ7Z2T5 733 aaKnown RBP18.43■□□□□ 0.54
CLCF1-201ENST00000312438 CEP170P1Q96L14 293 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 FGD4Q96M96 766 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 STRA6Q9BX79 667 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 PORCNQ9H237 461 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 EFCC1Q9HA90 598 aa18.43■□□□□ 0.54
CLCF1-201ENST00000312438 TMEM150BA6NC51 233 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 SOCS7O14512 581 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 NKRFO15226 690 aaKnown RBP eCLIP18.42■□□□□ 0.542e-7■■■■■ 28.4
CLCF1-201ENST00000312438 TGFB1I1O43294 461 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 ITGBL1O95965 494 aaPredicted RBP18.42■□□□□ 0.54
CLCF1-201ENST00000312438 UBA1P22314 1058 aaKnown RBP18.42■□□□□ 0.54
CLCF1-201ENST00000312438 KCNA1Q09470 495 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 SYCP1Q15431 976 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 NFIL3Q16649 462 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 XKR3Q5GH77 459 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 PLA2G4FQ68DD2 849 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 CCDC60Q8IWA6 550 aaPredicted RBP18.42■□□□□ 0.54
CLCF1-201ENST00000312438 ANKRD13CQ8N6S4 541 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 MORC4Q8TE76 937 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 IQCDQ96DY2 449 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 SH2D3AQ9BRG2 576 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 MORF4L1Q9UBU8 362 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 CAPN11Q9UMQ6 739 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 TELO2Q9Y4R8 837 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 CCP110O43303 1012 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 FRMD5Q7Z6J6 570 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 SLC17A8Q8NDX2 589 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 ZNF302Q9NR11 478 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 FAM184BQ9ULE4 1060 aa18.42■□□□□ 0.54
CLCF1-201ENST00000312438 LUC7L2Q9Y383 392 aaKnown RBP18.42■□□□□ 0.54
CLCF1-201ENST00000312438 MAFBQ9Y5Q3 323 aaPredicted RBP18.42■□□□□ 0.54
CLCF1-201ENST00000312438 SYNGAP1Q96PV0 1343 aa18.41■□□□□ 0.54
CLCF1-201ENST00000312438 IGKV6D-21A0A0A0MT36 114 aa18.41■□□□□ 0.54
CLCF1-201ENST00000312438 ASB14A6NK59 587 aa18.41■□□□□ 0.54
CLCF1-201ENST00000312438 STRNO43815 780 aa18.41■□□□□ 0.54
CLCF1-201ENST00000312438 SORBS3O60504 671 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms