RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 ACAP3Q96P50 834 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 MTA3Q9BTC8 594 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 SEL1LQ9UBV2 794 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 KCNH4Q9UQ05 1017 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 ATP1A2P50993 1020 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 GLE1Q53GS7 698 aaKnown RBP12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 NDE1Q9NXR1 346 aa12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 SRPRBQ9Y5M8 271 aaKnown RBP12.14□□□□□ -0.47
VCPIP1-201ENST00000310421 SPECC1L-ADORA2AF8WAN1 911 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 PDE1CQ14123 709 aaPredicted RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 RCN2Q14257 317 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 TMED2Q15363 201 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 PIGSQ96S52 555 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 MAGI3Q5TCQ9 1506 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 YWHAHQ04917 246 aaPredicted RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 C6orf118Q5T5N4 469 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 OTUB1Q96FW1 271 aaPredicted RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 PPP1R2P1Q96PQ5 205 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 SUDS3Q9H7L9 328 aaPredicted RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 EFCAB14O75071 495 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 MAP2K2P36507 400 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 STXBP2Q15833 593 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 ASNSD1Q9NWL6 643 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 DCTN3O75935 186 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 SLC4A1P02730 911 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 ARHGDIAP52565 204 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 TRIM72Q6ZMU5 477 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 CAPN12Q6ZSI9 719 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 ARL4CP56559 192 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 TRIM67Q6ZTA4 783 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 ADAT2Q7Z6V5 191 aaKnown RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 NXF1Q9UBU9 619 aaKnown RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 RAD17O75943 681 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 LTKP29376 864 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 AP3M2P53677 418 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 MAPK6Q16659 721 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 SLC26A4O43511 780 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 SNX2O60749 519 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 CDK8P49336 464 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 FAM133AQ8N9E0 248 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 GFPT2O94808 682 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 RWDD2BP57060 319 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 TAP1Q03518 808 aa12.13□□□□□ -0.47
VCPIP1-201ENST00000310421 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 CFAP36Q96G28 342 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 CRLF3Q8IUI8 442 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 NSUN6Q8TEA1 469 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 RMDN3Q96TC7 470 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 NHEJ1Q9H9Q4 299 aaPredicted RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 CLDN3O15551 220 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 DHX9Q08211 1270 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 FSCBQ5H9T9 825 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 TWF2Q6IBS0 349 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 MTRQ99707 1265 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 TSSK1BQ9BXA7 367 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 MRPL46Q9H2W6 279 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 CLTAP09496 248 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 MTERF2Q49AM1 385 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 EMBQ6PCB8 327 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 PYROXD1Q8WU10 500 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 FAF1Q9UNN5 650 aaPredicted RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 SPATA31E1Q6ZUB1 1445 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 MYL3P08590 195 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 PRELPP51888 382 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 LZICQ8WZA0 190 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 GOLGA8MH3BSY2 632 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 IGSF3O75054 1194 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 KIRREL3Q8IZU9 778 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 AFDNP55196 1824 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 CCDC188H7C350 402 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 OCRLQ01968 901 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 C7orf31Q8N865 590 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 RUBCNQ92622 972 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 ZMYND12Q9H0C1 365 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 TMEM63CQ9P1W3 806 aa12.12□□□□□ -0.47
VCPIP1-201ENST00000310421 AP3B1O00203 1094 aa12.11□□□□□ -0.47
VCPIP1-201ENST00000310421 DPYSL4O14531 572 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms