RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TRPV2Q9Y5S1 764 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 ZNF862O60290 1169 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 ATP4AP20648 1035 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 YWHABP31946 246 aaKnown RBP22.19■■□□□ 1.14
VEGFB-201ENST00000309422 IKBKEQ14164 716 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 DTHD1Q6ZMT9 781 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 C4orf19Q8IY42 314 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 DYDC2Q96IM9 177 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 CEP170P1Q96L14 293 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 EIF2AK1Q9BQI3 630 aaKnown RBP22.19■■□□□ 1.14
VEGFB-201ENST00000309422 GINS2Q9Y248 185 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 CDY2AQ9Y6F7 541 aa22.19■■□□□ 1.14
VEGFB-201ENST00000309422 POTEMA6NI47 508 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 WNT7AO00755 349 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 C22orf31O95567 290 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 CXCL10P02778 98 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 SYT1P21579 422 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 POLGP54098 1239 aaPredicted RBP22.18■■□□□ 1.14
VEGFB-201ENST00000309422 PTGDRQ13258 359 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 NBR1Q14596 966 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 FERMT3Q86UX7 667 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 USP38Q8NB14 1042 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 NIFKQ9BYG3 293 aaKnown RBP22.18■■□□□ 1.14
VEGFB-201ENST00000309422 SUGCTQ9HAC7 445 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 PCDHB6Q9Y5E3 794 aa22.18■■□□□ 1.14
VEGFB-201ENST00000309422 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.17■■□□□ 1.14
VEGFB-201ENST00000309422 ABHD14A-ACY1A0A1B0GW23 586 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.17■■□□□ 1.14
VEGFB-201ENST00000309422 STX6O43752 255 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 PRPHP41219 470 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 CDC42EP1Q00587 391 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 SPIRE1Q08AE8 756 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 CTTNQ14247 550 aaKnown RBP22.17■■□□□ 1.14
VEGFB-201ENST00000309422 FAM26DQ5JW98 314 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 EFCAB12Q6NXP0 572 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 SLC9A7Q96T83 725 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 IFIH1Q9BYX4 1025 aaKnown RBP22.17■■□□□ 1.14
VEGFB-201ENST00000309422 ZSCAN16Q9H4T2 348 aaPredicted RBP22.17■■□□□ 1.14
VEGFB-201ENST00000309422 TUFT1Q9NNX1 390 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 RGL1Q9NZL6 768 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 LRWD1Q9UFC0 647 aa22.17■■□□□ 1.14
VEGFB-201ENST00000309422 NBNO60934 754 aa22.16■■□□□ 1.14
VEGFB-201ENST00000309422 GHRP10912 638 aa22.16■■□□□ 1.14
VEGFB-201ENST00000309422 RFC5P40937 340 aa22.16■■□□□ 1.14
VEGFB-201ENST00000309422 FXR2P51116 673 aaKnown RBP eCLIP22.16■■□□□ 1.14
VEGFB-201ENST00000309422 SMAD3P84022 425 aaKnown RBP22.16■■□□□ 1.14
VEGFB-201ENST00000309422 TMEM62Q0P6H9 643 aa22.16■■□□□ 1.14
VEGFB-201ENST00000309422 KRT79Q5XKE5 535 aa22.16■■□□□ 1.14
VEGFB-201ENST00000309422 CYP26B1Q9NR63 512 aa22.16■■□□□ 1.14
VEGFB-201ENST00000309422 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.16■■□□□ 1.14
VEGFB-201ENST00000309422 GAS2O43903 313 aaKnown RBP22.15■■□□□ 1.14
VEGFB-201ENST00000309422 TOB1P50616 345 aaPredicted RBP22.15■■□□□ 1.14
VEGFB-201ENST00000309422 PAK2Q13177 524 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 RAB30Q15771 203 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 XKR9Q5GH70 373 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 PLA2G4FQ68DD2 849 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 TSHZ1Q6ZSZ6 1077 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 C16orf59Q7L2K0 433 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 ZBTB10Q96DT7 871 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 CELF4Q9BZC1 486 aaKnown RBP22.15■■□□□ 1.14
VEGFB-201ENST00000309422 SQORQ9Y6N5 450 aa22.15■■□□□ 1.14
VEGFB-201ENST00000309422 ZBTB42B2RXF5 422 aa22.14■■□□□ 1.14
VEGFB-201ENST00000309422 AMHP03971 560 aa22.14■■□□□ 1.14
VEGFB-201ENST00000309422 ATP2A2P16615 1042 aaKnown RBP22.14■■□□□ 1.14
VEGFB-201ENST00000309422 CLCN3P51790 818 aa22.14■■□□□ 1.14
VEGFB-201ENST00000309422 LRRC71Q8N4P6 559 aa22.14■■□□□ 1.14
VEGFB-201ENST00000309422 MSRAQ9UJ68 235 aa22.14■■□□□ 1.14
VEGFB-201ENST00000309422 CCT6AP40227 531 aaKnown RBP22.13■■□□□ 1.13
VEGFB-201ENST00000309422 ATP2C1P98194 919 aaPredicted RBP22.13■■□□□ 1.13
VEGFB-201ENST00000309422 MGAT3Q09327 533 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 PLEKHG4Q58EX7 1191 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 ARL6IP4Q66PJ3 421 aaKnown RBP22.13■■□□□ 1.13
VEGFB-201ENST00000309422 TRAF7Q6Q0C0 670 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 FAM43BQ6ZT52 329 aaPredicted RBP22.13■■□□□ 1.13
VEGFB-201ENST00000309422 ANO5Q75V66 913 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 DBF4BQ8NFT6 615 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 PHOSPHO2Q8TCD6 241 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 SNX29Q8TEQ0 813 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 TCP11Q8WWU5 503 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 CDK5RAP3Q96JB5 506 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 POLR3CQ9BUI4 534 aaPredicted RBP22.13■■□□□ 1.13
VEGFB-201ENST00000309422 ANKEF1Q9NU02 776 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 KDM3AQ9Y4C1 1321 aa22.13■■□□□ 1.13
VEGFB-201ENST00000309422 SLITRK3O94933 977 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 LYPLA2O95372 231 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 CHRNA1P02708 482 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 MUTP22033 750 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 FXR1P51114 621 aaKnown RBP eCLIP22.12■■□□□ 1.13
VEGFB-201ENST00000309422 PDIA5Q14554 519 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 FBXO47Q5MNV8 452 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 ZNF697Q5TEC3 545 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 KIAA0319LQ8IZA0 1049 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 RASSF8Q8NHQ8 419 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 NLRP7Q8WX94 980 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 NACC1Q96RE7 527 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 HSD17B14Q9BPX1 270 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 ZBED2Q9BTP6 218 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 FTHL17Q9BXU8 183 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 KAT6AQ92794 2004 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 MAFO75444 373 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms