RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 SURF1Q15526 300 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 WDR72Q3MJ13 1102 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 NT5DC1Q5TFE4 455 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 FRMD5Q7Z6J6 570 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 PLEKHH3Q7Z736 793 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 THNSL2Q86YJ6 484 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 REXO1L1PQ8IX06 675 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 IFNL2Q8IZJ0 200 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 LGI4Q8N135 537 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 NXPE1Q8N323 547 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 C20orf173Q96LM9 149 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 FOXB1Q99853 325 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 OR10A5Q9H207 317 aa6.25□□□□□ -1.41
GPBP1-202ENST00000309096 UBA6A0AVT1 1052 aaPredicted RBP6.24□□□□□ -1.41
GPBP1-202ENST00000309096 NOBOXO60393 691 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 IL18BPO95998 194 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 HOXA5P20719 270 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 CD40P25942 277 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 APEX1P27695 318 aaKnown RBP6.24□□□□□ -1.41
GPBP1-202ENST00000309096 POLD1P28340 1107 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 LSSP48449 732 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 ALDH6A1Q02252 535 aaKnown RBP6.24□□□□□ -1.41
GPBP1-202ENST00000309096 STILQ15468 1287 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 TTC38Q5R3I4 469 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 PHF19Q5T6S3 580 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 TIGD7Q6NT04 549 aaPredicted RBP6.24□□□□□ -1.41
GPBP1-202ENST00000309096 KRT26Q7Z3Y9 468 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 SMC1BQ8NDV3 1235 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 ERCC4Q92889 916 aaPredicted RBP6.24□□□□□ -1.41
GPBP1-202ENST00000309096 TTC1Q99614 292 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 TOMM22Q9NS69 142 aa6.24□□□□□ -1.41
GPBP1-202ENST00000309096 THG1LQ9NWX6 298 aaKnown RBP6.24□□□□□ -1.41
GPBP1-202ENST00000309096 PRRG2O14669 202 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 BRINP1O60477 761 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 MAFO75444 373 aaPredicted RBP6.23□□□□□ -1.41
GPBP1-202ENST00000309096 KLHL18O94889 574 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 SLC9A1P19634 815 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 NFATC3Q12968 1075 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 LRRC32Q14392 662 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 ZNF568Q3ZCX4 644 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 GPR158Q5T848 1215 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 Q6ZUG5 572 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 RNF180Q86T96 592 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 PHYKPLQ8IUZ5 450 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 CHTF18Q8WVB6 975 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 MAML3Q96JK9 1138 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 ELF4Q99607 663 aaPredicted RBP6.23□□□□□ -1.41
GPBP1-202ENST00000309096 IFT22Q9H7X7 185 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 SPC25Q9HBM1 224 aa6.23□□□□□ -1.41
GPBP1-202ENST00000309096 USP36Q9P275 1121 aaKnown RBP6.23□□□□□ -1.41
GPBP1-202ENST00000309096 RASSF10A6NK89 507 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 ZNF891A8MT65 544 aaPredicted RBP6.22□□□□□ -1.41
GPBP1-202ENST00000309096 B8ZZF3 427 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 DVL2O14641 736 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 FKBP9O95302 570 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 MPIG6BO95866 241 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 CNGA1P29973 690 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 MC4RP32245 332 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 LSP1P33241 339 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 FKBP9P1Q75LS8 142 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 OTOP2Q7RTS6 562 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 RTN4RL1Q86UN2 441 aaPredicted RBP6.22□□□□□ -1.41
GPBP1-202ENST00000309096 C7orf31Q8N865 590 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 RPGRQ92834 1020 aaKnown RBP6.22□□□□□ -1.41
GPBP1-202ENST00000309096 AJUBAQ96IF1 538 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 GPR101Q96P66 508 aaPredicted RBP6.22□□□□□ -1.41
GPBP1-202ENST00000309096 TUBGCP5Q96RT8 1024 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 CARD11Q9BXL7 1154 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 KCNG1Q9UIX4 513 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 ZDHHC9Q9Y397 364 aa6.22□□□□□ -1.41
GPBP1-202ENST00000309096 RAB11FIP3O75154 756 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 ULK1O75385 1050 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 VIL1P09327 827 aaKnown RBP6.21□□□□□ -1.41
GPBP1-202ENST00000309096 BCAR1P56945 870 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 PHC1P78364 1004 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 IL13RA1P78552 427 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 FAPQ12884 760 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.41
GPBP1-202ENST00000309096 ZFYVE27Q5T4F4 411 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 CREB3L3Q68CJ9 461 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 GRAMD4Q6IC98 578 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 FOXRED1Q96CU9 486 aaPredicted RBP6.21□□□□□ -1.41
GPBP1-202ENST00000309096 MBD6Q96DN6 1003 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 TEPSINQ96N21 525 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 AMNQ9BXJ7 453 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 RTEL1Q9NZ71 1219 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 ADAM29Q9UKF5 820 aa6.21□□□□□ -1.41
GPBP1-202ENST00000309096 APOBEC2Q9Y235 224 aaKnown RBP6.21□□□□□ -1.41
GPBP1-202ENST00000309096 NCANO14594 1321 aa6.21□□□□□ -1.42
GPBP1-202ENST00000309096 A0A0G2JNJ9 132 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 DNAJC6O75061 913 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 PRLP01236 227 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 SLC6A3Q01959 620 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 USP10Q14694 798 aaKnown RBP6.2□□□□□ -1.42
GPBP1-202ENST00000309096 ZMAT1Q5H9K5 638 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 SLFN12LQ6IEE8 588 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 RALYLQ86SE5 291 aaKnown RBP6.2□□□□□ -1.42
GPBP1-202ENST00000309096 ZDHHC14Q8IZN3 488 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms