RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 EPHB4P54760 987 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 ZBTB33Q86T24 672 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 IL17RBQ9NRM6 502 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 DENND3A2RUS2 1198 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 POLRMTO00411 1230 aaKnown RBP12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 NAA30Q147X3 362 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 SWSAP1Q6NVH7 229 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM205AQ6ZU69 1335 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 GOLGA8KD6RF30 607 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 RGS16O15492 202 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 RNF8O76064 485 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 CHP1Q99653 195 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 COMMD10Q9Y6G5 202 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 DLG5Q8TDM6 1919 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 NDC80O14777 642 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 NMT1P30419 496 aaKnown RBP12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 EZH2Q15910 746 aaKnown RBP12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 FRMD5Q7Z6J6 570 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 WDR24Q96S15 920 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 PASKQ96RG2 1323 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 TBC1D8O95759 1140 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 SCYL2Q6P3W7 929 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 PLCD4Q9BRC7 762 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 PCDHA10Q9Y5I2 948 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 MRC1P22897 1456 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 HIP1RO75146 1068 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 PALMO75781 387 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 OSTNP61366 133 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 RSAD2Q8WXG1 361 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 REEP2Q9BRK0 252 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 NXF1Q9UBU9 619 aaKnown RBP12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 SLC26A4O43511 780 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 SLC37A4O43826 429 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 STK10O94804 968 aaKnown RBP12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 APBA1Q02410 837 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 SLC16A10Q8TF71 515 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 NLRP4Q96MN2 994 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 PNMA3Q9UL41 463 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 ZNF148Q9UQR1 794 aa12.36□□□□□ -0.43
PCDHGC3-201ENST00000308177 LDHAP00338 332 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 RPA1P27694 616 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 CA8P35219 290 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 COG2Q14746 738 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 PPP1R21Q6ZMI0 780 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 PTF1AQ7RTS3 328 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 HAUS6Q7Z4H7 955 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 TTC16Q8NEE8 873 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 AGBL3Q8NEM8 1001 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 NBPF3Q9H094 633 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 EHD4Q9H223 541 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 ABCB6Q9NP58 842 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM114A2Q9NRY5 505 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 TRIM49P0CI25 452 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 TRIM49CP0CI26 452 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 KRT15P19012 456 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 GBP1P32455 592 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 VAMP7P51809 220 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 DDR1Q08345 913 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 PDXDC1Q6P996 788 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM163AQ96GL9 167 aaPredicted RBP12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM167AQ96KS9 214 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 VPS37BQ9H9H4 285 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 KIAA1586Q9HCI6 787 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 MRPL47Q9HD33 250 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 SCAF8Q9UPN6 1271 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 HSPA6P17066 643 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 NEDD9Q14511 834 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 KAZNQ674X7 775 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 PPP1R2P3Q6NXS1 205 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 RNF169Q8NCN4 708 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 RIOX1Q9H6W3 641 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 MYOZ2Q9NPC6 264 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 BFSP1Q12934 665 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 BAATQ14032 418 aaPredicted RBP12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 SURF1Q15526 300 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 TAF12Q16514 161 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 APOL6Q9BWW8 343 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
PCDHGC3-201ENST00000308177 DDTLA6NHG4 134 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 CD58P19256 250 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 CNGA1P29973 690 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 MNAT1P51948 309 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 KRT81Q14533 505 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 SETDB1Q15047 1291 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 EARS2Q5JPH6 523 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 SESTD1Q86VW0 696 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 FBF1Q8TES7 1133 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 RUNDC3BQ96NL0 473 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms