RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 NCOR2Q9Y618 2525 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 OTOGLQ3ZCN5 2332 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 PALM3A6NDB9 673 aaPredicted RBP13.62□□□□□ -0.23
SMIM4-201ENST00000307106 MGEA5O60502 916 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 ATP9AO75110 1047 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 KCNA2P16389 499 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 NPR3P17342 541 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 KRT76Q01546 638 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 PCNX4Q63HM2 1172 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 TMC7Q7Z402 723 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 ADAM2Q99965 735 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 RTP3Q9BQQ7 232 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 DBR1Q9UK59 544 aaKnown RBP13.62□□□□□ -0.23
SMIM4-201ENST00000307106 PCDHA2Q9Y5H9 948 aa13.62□□□□□ -0.23
SMIM4-201ENST00000307106 FRYLO94915 3013 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 DOCK8Q8NF50 2099 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 DENND3A2RUS2 1198 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 FGFR1P11362 822 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 PDE4AP27815 886 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 MFAP1P55081 439 aaKnown RBP13.61□□□□□ -0.23
SMIM4-201ENST00000307106 SLC35G1Q2M3R5 365 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 KIAA1841Q6NSI8 718 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 SLC24A5Q71RS6 500 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 TRAPPC12Q8WVT3 735 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 HINFPQ9BQA5 517 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 RIOX1Q9H6W3 641 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 ERVK-5Q9HDB9 667 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 RGS18Q9NS28 235 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 USTQ9Y2C2 406 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 CACNA1IQ9P0X4 2223 aa13.61□□□□□ -0.23
SMIM4-201ENST00000307106 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 C9IYK1 514 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 RPS6KA5O75582 802 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 KRT17Q04695 432 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 SMC1AQ14683 1233 aaKnown RBP13.6□□□□□ -0.23
SMIM4-201ENST00000307106 ATAT1Q5SQI0 421 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 RARS2Q5T160 578 aaKnown RBP13.6□□□□□ -0.23
SMIM4-201ENST00000307106 XRRA1Q6P2D8 792 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 KCNT2Q6UVM3 1135 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 FAM43BQ6ZT52 329 aaPredicted RBP13.6□□□□□ -0.23
SMIM4-201ENST00000307106 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 NME8Q8N427 588 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 SMARCC2Q8TAQ2 1214 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
SMIM4-201ENST00000307106 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 CDHR1Q96JP9 859 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 ATP6V0A4Q9HBG4 840 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 CYP26B1Q9NR63 512 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 DLL3Q9NYJ7 618 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 GINS2Q9Y248 185 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 R4GN57 208 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
SMIM4-201ENST00000307106 MTCL1Q9Y4B5 1905 aaKnown RBP13.59□□□□□ -0.23
SMIM4-201ENST00000307106 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 C2orf71A6NGG8 1288 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 CYTH3O43739 400 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 CLASP2O75122 1294 aaKnown RBP13.59□□□□□ -0.23
SMIM4-201ENST00000307106 EOMESO95936 686 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 PPM1AP35813 382 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 PBX3P40426 434 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 SIX5Q8N196 739 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 C12orf76Q8N812 135 aaPredicted RBP13.59□□□□□ -0.23
SMIM4-201ENST00000307106 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
SMIM4-201ENST00000307106 ZNF558Q96NG5 402 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 KRT23Q9C075 422 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 TMEM161AQ9NX61 479 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 PKD2L1Q9P0L9 805 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 RCAN3Q9UKA8 241 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 FBXL21Q9UKT6 434 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 DUSP12Q9UNI6 340 aa13.59□□□□□ -0.23
SMIM4-201ENST00000307106 NOC2LQ9Y3T9 749 aaKnown RBP13.59□□□□□ -0.23
SMIM4-201ENST00000307106 CA8P35219 290 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 PDE1AP54750 535 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 TDGQ13569 410 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 GRM4Q14833 912 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 PLCB4Q15147 1175 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 SEC23AQ15436 765 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 ODR4Q5SWX8 454 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 USP17L6PQ6QN14 398 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 TMEM40Q8WWA1 233 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 CUL5Q93034 780 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 ACSF2Q96CM8 615 aaPredicted RBP13.58□□□□□ -0.24
SMIM4-201ENST00000307106 PCYT2Q99447 389 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 TMEM117Q9H0C3 514 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 AZI2Q9H6S1 392 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 ELAC1Q9H777 363 aaKnown RBP13.58□□□□□ -0.24
SMIM4-201ENST00000307106 CNNM2Q9H8M5 875 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 SPG21Q9NZD8 308 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
SMIM4-201ENST00000307106 ST3GAL5Q9UNP4 418 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.24
SMIM4-201ENST00000307106 MYH15Q9Y2K3 1946 aa13.58□□□□□ -0.24
SMIM4-201ENST00000307106 ACACBO00763 2458 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 GPR182O15218 404 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms