RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MMEL1Q495T6 779 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 CCDC38Q502W7 563 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 ANGEL2Q5VTE6 544 aaKnown RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 DEFB129Q9H1M3 183 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 GGA3Q9NZ52 723 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 GPR75-ASB3A0A0A6YYF3 556 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 HOXA10P31260 410 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 SESTD1Q86VW0 696 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 MICAL1Q8TDZ2 1067 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 NT5C1BQ96P26 610 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 GCOM2Q9BZD3 368 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PUS7LQ9H0K6 701 aaKnown RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PHEXP78562 749 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 FAM83BQ5T0W9 1011 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 TADA2BQ86TJ2 420 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PCSK9Q8NBP7 692 aaKnown RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PDZD8Q8NEN9 1154 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 PGBD4Q96DM1 585 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 GBA2Q9HCG7 927 aaPredicted RBP8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 HOMER3Q9NSC5 361 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 BARHL2Q9NY43 387 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 AMFRQ9UKV5 643 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 FLT1P17948 1338 aa8.99□□□□□ -0.97
PCDHB1-201ENST00000306549 C12orf60Q5U649 245 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 C9orf131Q5VYM1 1079 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 RNF219Q5W0B1 726 aaPredicted RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 BBOF1Q8ND07 529 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 SOCS4Q8WXH5 440 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 LRGUKQ96M69 825 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 MYL10Q9BUA6 226 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 PPP1R12CQ9BZL4 782 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 JPH1Q9HDC5 661 aaPredicted RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 DPP7Q9UHL4 492 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 TEKT2Q9UIF3 430 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 ZMYM2Q9UBW7 1377 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 DUOX1Q9NRD9 1551 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 RPN1P04843 607 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 GMPSP49915 693 aaPredicted RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 RNF10Q8N5U6 811 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 EIF2AQ9BY44 585 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 TSPYL2Q9H2G4 693 aaPredicted RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 OLA1Q9NTK5 396 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 CCL15-CCL14A0A0B4J2E2 113 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 FAM95CA0A1B0GW59 222 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 SUPT20HL2P0C7V6 817 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 CCL15Q16663 113 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 PHLDB3Q6NSJ2 640 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 PI4K2BQ8TCG2 481 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 MRPL47Q9HD33 250 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 ZNF70Q9UC06 446 aaPredicted RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 NUMA1Q14980 2115 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 TBX3O15119 743 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 PRELPP51888 382 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 AFAP1L1Q8TED9 768 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 MYO1AQ9UBC5 1043 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 SALL1Q9NSC2 1324 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 ZNF609O15014 1411 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 QARSP47897 775 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 ARL13BQ3SXY8 428 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 PGBD1Q96JS3 809 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 DDX50Q9BQ39 737 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 ZNF212Q9UDV6 495 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 SRPRBQ9Y5M8 271 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 CEP104O60308 925 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 GSPT1P15170 499 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 STX1BP61266 288 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 COL23A1Q86Y22 540 aaPredicted RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 TMEM47Q9BQJ4 181 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 TEX12Q9BXU0 123 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 TUFT1Q9NNX1 390 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 NDUFB9Q9Y6M9 179 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 RGPD2P0DJD1 1756 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 NVLO15381 856 aaKnown RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 SLC26A2P50443 739 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 POTEDQ86YR6 584 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 EDEM3Q9BZQ6 932 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 TRIM45Q9H8W5 580 aaPredicted RBP8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 EPS15L1Q9UBC2 864 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 FAM205AQ6ZU69 1335 aa8.98□□□□□ -0.97
PCDHB1-201ENST00000306549 ITGB4P16144 1822 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 PSMD14O00487 310 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 STRNO43815 780 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 SCRN1Q12765 414 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 TOPAZ1Q8N9V7 1692 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 EFCAB14O75071 495 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 TBXAS1P24557 533 aaPredicted RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 RECQLP46063 649 aaPredicted RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 BEST2Q8NFU1 509 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 SLC38A7Q9NVC3 462 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 ZC3H4Q9UPT8 1303 aaKnown RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 GPC4O75487 556 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 TSPY1Q01534 308 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 PTH1RQ03431 593 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 ENOSF1Q7L5Y1 443 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 CATSPER4Q7RTX7 472 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 ERO1AQ96HE7 468 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 MMTAG2Q9BU76 263 aaKnown RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 MRPL4Q9BYD3 311 aaKnown RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 ZNF302Q9NR11 478 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms