RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX54-201ENST00000306014 ADGRF4Q8IZF3 695 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 CCDC89Q8N998 374 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 N4BP2L2Q92802 583 aaPredicted RBP14.37□□□□□ -0.11
DDX54-201ENST00000306014 FAM237AA0A1B0GTK4 181 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 TCP10L2B9ZVM9 353 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 BMP3P12645 472 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 LSP1P33241 339 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 GCKP35557 465 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
DDX54-201ENST00000306014 CCDC62Q6P9F0 684 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 POMGNT1Q8WZA1 660 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 FERMT1Q9BQL6 677 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 RIOK1Q9BRS2 568 aaKnown RBP14.37□□□□□ -0.11
DDX54-201ENST00000306014 MXI1P50539 228 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 RASSF2P50749 326 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 ARHGAP4P98171 946 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 C6orf118Q5T5N4 469 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 LARGE2Q8N3Y3 721 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 EPN3Q9H201 632 aa14.37□□□□□ -0.11
DDX54-201ENST00000306014 A0A1W2PQJ5 194 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 RAD51CO43502 376 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 PEX19P40855 299 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 PDIA5Q14554 519 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 NKX1-1Q15270 411 aaPredicted RBP14.36□□□□□ -0.11
DDX54-201ENST00000306014 PPP1R21Q6ZMI0 780 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 DBNDD1Q9H9R9 158 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 MLXIPLQ9NP71 852 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 FAM205AQ6ZU69 1335 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 SORBS3O60504 671 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 BBOX1O75936 387 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 AKR1B1P15121 316 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 SESN3P58005 492 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 TTLL12Q14166 644 aaPredicted RBP14.36□□□□□ -0.11
DDX54-201ENST00000306014 DRAP1Q14919 205 aaPredicted RBP14.36□□□□□ -0.11
DDX54-201ENST00000306014 TTBK2Q6IQ55 1244 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 NLRX1Q86UT6 975 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 ZNF473Q8WTR7 871 aaKnown RBP14.36□□□□□ -0.11
DDX54-201ENST00000306014 ARL8AQ96BM9 186 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 RAB20Q9NX57 234 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 TXNDC16Q9P2K2 825 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 NTSR2O95665 410 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 KLRK1P26718 216 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 ZNF746Q6NUN9 644 aaPredicted RBP14.36□□□□□ -0.11
DDX54-201ENST00000306014 FOXR1Q6PIV2 292 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 CTAGE3PQ8IX95 158 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 RHOT2Q8IXI1 618 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 RAB3IPQ96QF0 476 aaPredicted RBP14.36□□□□□ -0.11
DDX54-201ENST00000306014 MXD3Q9BW11 206 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 KBTBD4Q9NVX7 518 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 GOLGA8IPA6NC78 632 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 GOLGA8JA6NMD2 632 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 TROVE2P10155 538 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX54-201ENST00000306014 ADCY2Q08462 1091 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 CCDC38Q502W7 563 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 P3H4Q92791 437 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 ANAPC5Q9UJX4 755 aa14.36□□□□□ -0.11
DDX54-201ENST00000306014 TTI1O43156 1089 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 HDLBPQ00341 1268 aaKnown RBP14.35□□□□□ -0.11
DDX54-201ENST00000306014 IL9RQ01113 521 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 PTK2Q05397 1052 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 SYDE2Q5VT97 1194 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.35□□□□□ -0.11
DDX54-201ENST00000306014 LRRC8CQ8TDW0 803 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 RUBCNQ92622 972 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 HVCN1Q96D96 273 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 DHX36Q9H2U1 1008 aaKnown RBP14.35□□□□□ -0.11
DDX54-201ENST00000306014 SMIM22K7EJ46 135 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 HNRNPDLO14979 420 aaKnown RBP14.35□□□□□ -0.11
DDX54-201ENST00000306014 TRIM49P0CI25 452 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 TRIM49CP0CI26 452 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 SLC9A1P19634 815 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 PMS2P54278 862 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 TMED2Q15363 201 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 SLC27A3Q5K4L6 730 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 PALM2Q8IXS6 379 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 CNKSR1Q969H4 720 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 RNPC3Q96LT9 517 aaKnown RBP14.35□□□□□ -0.11
DDX54-201ENST00000306014 CSRNP1Q96S65 589 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 WDR11Q9BZH6 1224 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 NWD1Q149M9 1564 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 MAP2K7O14733 419 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 CIB2O75838 187 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 LIG4P49917 911 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 SF3B3Q15393 1217 aaKnown RBP14.35□□□□□ -0.11
DDX54-201ENST00000306014 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
DDX54-201ENST00000306014 LCMT1Q9UIC8 334 aa14.35□□□□□ -0.11
DDX54-201ENST00000306014 UCHL3P15374 230 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 RASA1P20936 1047 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 TMOD1P28289 359 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 DMP1Q13316 513 aaPredicted RBP14.34□□□□□ -0.11
DDX54-201ENST00000306014 DLGAP5Q15398 846 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 SUPT20HQ8NEM7 779 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 THOC1Q96FV9 657 aaKnown RBP14.34□□□□□ -0.11
DDX54-201ENST00000306014 PPEF1O14829 653 aaPredicted RBP14.34□□□□□ -0.11
DDX54-201ENST00000306014 DKC1O60832 514 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX54-201ENST00000306014 ADRA2BP18089 450 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms