RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ARHGEF35A5YM69 484 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 EIF3CLB5ME19 914 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 CALUO43852 315 aaPredicted RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 TLR2O60603 784 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 PPP1R37O75864 691 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 LYPLA2O95372 231 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 RARRES1P49788 294 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 CYP27A1Q02318 531 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 ERCC6LQ2NKX8 1250 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 HGSNATQ68CP4 663 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 PDXDC1Q6P996 788 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP47-201ENST00000305481 CCDC170Q8IYT3 715 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 EIF3CQ99613 913 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 CARD6Q9BX69 1037 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 TEX13BQ9BXU2 312 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 ADARB2Q9NS39 739 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 ZNHIT6Q9NWK9 470 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 TMOD4Q9NZQ9 345 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 RNF181Q9P0P0 153 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 SEL1LQ9UBV2 794 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 DBR1Q9UK59 544 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 FAM184BQ9ULE4 1060 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 SAMM50Q9Y512 469 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 DUSP10Q9Y6W6 482 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 ODR4Q5SWX8 454 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 ZNF662Q6ZS27 426 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 MAEAQ7L5Y9 396 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 PLCD3Q8N3E9 789 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 NEK11Q8NG66 645 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 INPP4AQ96PE3 977 aaPredicted RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 LSM14BQ9BX40 385 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 EDEM3Q9BZQ6 932 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 NLRC4Q9NPP4 1024 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 HOXC10Q9NYD6 342 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 ARMCX3Q9UH62 379 aaPredicted RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 LCTP09848 1927 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 LCA5LO95447 670 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 CCND2P30279 289 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 YWHABP31946 246 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 EIF4A3P38919 411 aaKnown RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 ASTE1Q2TB18 679 aaPredicted RBP7.2□□□□□ -1.26
USP47-201ENST00000305481 FAM178BQ8IXR5 827 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 SLC35C1Q96A29 364 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 GANQ9H2C0 597 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 DMAC2Q9NW81 257 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 CEP72Q9P209 647 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 GUCA1BQ9UMX6 200 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 PTPRFP10586 1907 aa7.2□□□□□ -1.26
USP47-201ENST00000305481 OTOFQ9HC10 1997 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 TADA3O75528 432 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 TFRCP02786 760 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 ACTN1P12814 892 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 KCNA2P16389 499 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 SLC9A1P19634 815 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 POLR2FP61218 127 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 FSTL1Q12841 308 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 HSP90AA2PQ14568 343 aaPredicted RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 NFIL3Q16649 462 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 UTP14CQ5TAP6 766 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 XRRA1Q6P2D8 792 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 C4orf19Q8IY42 314 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 NSUN6Q8TEA1 469 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 GPRASP2Q96D09 838 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 SYT17Q9BSW7 474 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 HAUS4Q9H6D7 363 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 LOXHD1Q8IVV2 1947 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 BACH1O14867 736 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 SLC16A3O15427 465 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 RRP9O43818 475 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 STBD1O95210 358 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 BRD2P25440 801 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 RPL13P26373 211 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 NPEPPSP55786 919 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 KRT83P78385 493 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 PLS1Q14651 629 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 ANO5Q75V66 913 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 TRMT1LQ7Z2T5 733 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 RBM46Q8TBY0 533 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 CCDC42Q96M95 316 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 ACAD9Q9H845 621 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 AGPAT3Q9NRZ7 376 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 BTBD7Q9P203 1132 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 MYO1AQ9UBC5 1043 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 PCDHB13Q9Y5F0 798 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 MYPNQ86TC9 1320 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 LOC285556D6RIA3 1793 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 MYH11P35749 1972 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 WDR64B1ANS9 1081 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 AFPP02771 609 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 XRCC5P13010 732 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 PON1P27169 355 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 JAK3P52333 1124 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 KIF11P52732 1056 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 PSMC5P62195 406 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 KRT76Q01546 638 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 CCDC122Q5T0U0 273 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 PLA2G4FQ68DD2 849 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 MOB2Q70IA6 237 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms