RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 ANKARQ7Z5J8 1434 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 ERBB3P21860 1342 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 CREB3O43889 395 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 KRT37O76014 449 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 BRAFP15056 766 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 PHEXP78562 749 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 TMCO4Q5TGY1 634 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 MORC4Q8TE76 937 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 GINM1Q9NU53 330 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 MID2Q9UJV3 735 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 MED7O43513 233 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 NR3C1P04150 777 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 GRAMD1BQ3KR37 738 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 SERPINB13Q9UIV8 391 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 PSMD14O00487 310 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 ARL4CP56559 192 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 FBXW10Q5XX13 1052 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 PCGF5Q86SE9 256 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 PIP4K2CQ8TBX8 421 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 ADPGKQ9BRR6 497 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 GOLGA8SH3BPF8 625 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 HAUS5O94927 633 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 GGPS1O95749 300 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 MDM2Q00987 491 aaPredicted RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 TMED1Q13445 227 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 BYSLQ13895 437 aaKnown RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 HDAC11Q96DB2 347 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 THOC1Q96FV9 657 aaKnown RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 CYTH2Q99418 400 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 POLR1AO95602 1720 aaPredicted RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 CORO7P57737 925 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 ART3Q13508 389 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 TXNRD1Q16881 649 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 WDR75Q8IWA0 830 aaKnown RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 LARGE2Q8N3Y3 721 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 CHP1Q99653 195 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 ANO3Q9BYT9 981 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 ZNF185O15231 689 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 PDHA1P08559 390 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 TBC1D9BQ66K14 1250 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 ANKRD36BP1Q96IX9 119 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 RBM41Q96IZ5 413 aaKnown RBP13.79□□□□□ -0.2
COL3A1-201ENST00000304636 BAG5Q9UL15 447 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 CDC42BPBQ9Y5S2 1711 aa13.79□□□□□ -0.2
COL3A1-201ENST00000304636 COPEO14579 308 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 PDE6BP35913 854 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 CDR2Q01850 454 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 AP3B2Q13367 1082 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 RAD9BQ6WBX8 426 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 CFAP36Q96G28 342 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 CALN1Q9BXU9 219 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 FAM96AQ9H5X1 160 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 YY1AP1Q9H869 796 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 AS3MTQ9HBK9 375 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 SMYD2Q9NRG4 433 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 PPARGC1AQ9UBK2 798 aaKnown RBP13.78□□□□□ -0.2
COL3A1-201ENST00000304636 MADDQ8WXG6 1647 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 POTEMA6NI47 508 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 CDK8P49336 464 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 KPNA2P52292 529 aaKnown RBP13.78□□□□□ -0.2
COL3A1-201ENST00000304636 KLHL38Q2WGJ6 581 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 MED10Q9BTT4 135 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 SEPT9Q9UHD8 586 aaPredicted RBP13.78□□□□□ -0.2
COL3A1-201ENST00000304636 LCMT1Q9UIC8 334 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 SIK1P57059 783 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 KRT39Q6A163 491 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 TTC17Q96AE7 1141 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 CNOT8Q9UFF9 292 aaKnown RBP13.78□□□□□ -0.2
COL3A1-201ENST00000304636 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 TLK1Q9UKI8 766 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 UNC13BO14795 1591 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 ZRANB2O95218 330 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL3A1-201ENST00000304636 SRGAP2BP0DMP2 458 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 SRGNP10124 158 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 UBXN2AP68543 259 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 DPYDQ12882 1025 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 TRIML2Q8N7C3 387 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 DEPDC1BQ8WUY9 529 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 FAM167BQ9BTA0 163 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.78□□□□□ -0.2
COL3A1-201ENST00000304636 CPDO75976 1380 aa13.78□□□□□ -0.2
COL3A1-201ENST00000304636 H2AFXP16104 143 aaPredicted RBP13.77□□□□□ -0.2
COL3A1-201ENST00000304636 HSPA9P38646 679 aaKnown RBP13.77□□□□□ -0.2
COL3A1-201ENST00000304636 FXR1P51114 621 aaKnown RBP eCLIP13.77□□□□□ -0.2
COL3A1-201ENST00000304636 TRIM56Q9BRZ2 755 aaKnown RBP13.77□□□□□ -0.2
COL3A1-201ENST00000304636 SUGCTQ9HAC7 445 aa13.77□□□□□ -0.2
COL3A1-201ENST00000304636 RASSF10A6NK89 507 aa13.77□□□□□ -0.2
COL3A1-201ENST00000304636 PFDN6O15212 129 aa13.77□□□□□ -0.2
COL3A1-201ENST00000304636 AGTP01019 485 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms