RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 BTDP43251 543 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 CAPZA2P47755 286 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 DMC1Q14565 340 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 KRT72Q14CN4 511 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 LRRC41Q15345 812 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 CCDC92Q53HC0 331 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 SDR42E1Q8WUS8 393 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 PPP1R16BQ96T49 567 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 ELAC2Q9BQ52 826 aaKnown RBP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 VPS11Q9H270 941 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 SELENONQ9NZV5 590 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 PCDHGB4Q9UN71 923 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 MAP3K15Q6ZN16 1313 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 BTBD18B2RXH4 712 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 KRT14P02533 472 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 CHGBP05060 677 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 KRT7P08729 469 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 NNMTP40261 264 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 HDLBPQ00341 1268 aaKnown RBP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 MAN2A1Q16706 1144 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 ANKS3Q6ZW76 656 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 ELMOD1Q8N336 334 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 TTC8Q8TAM2 541 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 DHTKD1Q96HY7 919 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 H0Y626 953 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 PRPF4O43172 522 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 KRT38O76015 456 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 TRIM16O95361 564 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 E2F4Q16254 413 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 THEMIS2Q5TEJ8 643 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 CCNYL1Q8N7R7 359 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 P2RX5Q93086 422 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 ARHGAP10A1A4S6 786 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 KITP10721 976 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 IMPDH2P12268 514 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 PSMA2P25787 234 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 DDIT3P35638 169 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 PPP6R3Q5H9R7 873 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 HDDC2Q7Z4H3 204 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 SAYSD1Q9NPB0 183 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
CLIP1-201ENST00000302528 LZTS1Q9Y250 596 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 ZNF711Q9Y462 761 aa11.11□□□□□ -0.63
CLIP1-201ENST00000302528 YTHDC2Q9H6S0 1430 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 CCDC151A5D8V7 595 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 UBXN8O00124 270 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ZBTB7BO15156 539 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ARIH2O95376 493 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ADD1P35611 737 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SERPINB10P48595 397 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 RBL2Q08999 1139 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 DYNC1I2Q13409 638 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 AARS2Q5JTZ9 985 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 MAGEB5Q9BZ81 275 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 WDR11Q9BZH6 1224 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 RPF1Q9H9Y2 349 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 AFF4Q9UHB7 1163 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 TNRQ92752 1358 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 LAD1O00515 517 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 PJA2O43164 708 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 NDUFA8P51970 172 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 POU5F1BQ06416 359 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SEPT2Q15019 361 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SURF1Q15526 300 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 DCAF4L1Q3SXM0 396 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 OR6B3Q8NGW1 331 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 OPTNQ96CV9 577 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SAAL1Q96ER3 474 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 YIPF3Q9GZM5 350 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SEL1LQ9UBV2 794 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 PCDHA7Q9UN72 937 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 hCG_2014768A0A024R1R8 64 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 NBNO60934 754 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SLC9A1P19634 815 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 MXI1P50539 228 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ANGPT1Q15389 498 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ANO5Q75V66 913 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ERICH1Q86X53 443 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 TRMT2AQ8IZ69 625 aaKnown RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ZFP42Q96MM3 310 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 FTOQ9C0B1 505 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SENP1Q9P0U3 644 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ZFP69BQ9UJL9 534 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 MAST1Q9Y2H9 1570 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 MYCP01106 439 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-201ENST00000302528 PDHA1P08559 390 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 CCND2P30279 289 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 HOXC9P31274 260 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ARL4CP56559 192 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 GOLGA8FQ08AF8 430 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 MTERF2Q49AM1 385 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 LRRC8BQ6P9F7 803 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 SPICE1Q8N0Z3 855 aa11.1□□□□□ -0.63
CLIP1-201ENST00000302528 ZNF280CQ8ND82 737 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms