RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PNMA6FA0A0J9YX94 578 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 PSMD7P51665 324 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 AP3B2Q13367 1082 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 BEND6Q5SZJ8 279 aaPredicted RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 CHMP6Q96FZ7 201 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 PAWRQ96IZ0 340 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 OSBPL9Q96SU4 736 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 ING2Q9H160 280 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SATB2Q9UPW6 733 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 PMLP29590 882 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 HNRNPH2P55795 449 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 TMPRSS15P98073 1019 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 ADD3Q9UEY8 706 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 USP32Q8NFA0 1604 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 LRRC7Q96NW7 1537 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 ASAP2O43150 1006 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 CTIFO43310 598 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 TMCC1O94876 653 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 TAP1Q03518 808 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 MORF4L2Q15014 288 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 TRIM72Q6ZMU5 477 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SKA2Q8WVK7 121 aaPredicted RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 ATP6V1E2Q96A05 226 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 DHX36Q9H2U1 1008 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 BTG4Q9NY30 223 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 CLEC11AQ9Y240 323 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 USP6P35125 1406 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 UBE4BO95155 1302 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SYCE1LA8MT33 242 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 PALMO75781 387 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SLFN13Q68D06 897 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 KANSL2Q9H9L4 492 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 EMILIN3Q9NT22 766 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 L3MBTL1Q9Y468 752 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 CXCR5P32302 372 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 LRRC8BQ6P9F7 803 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 METTL23Q86XA0 190 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SDR42E1Q8WUS8 393 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 KRT82Q9NSB4 513 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 CSADQ9Y600 493 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 A0A1W2PQC6 194 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 STXBP3O00186 592 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 TBXAS1P24557 533 aaPredicted RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 BIRC2Q13490 618 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 C3orf20Q8ND61 904 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 ECT2Q9H8V3 914 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 TBK1Q9UHD2 729 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SLC13A4Q9UKG4 626 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 HNRNPCL2B2RXH8 293 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 GOLGA8MH3BSY2 632 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 LRRN2O75325 713 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 PSAPP07602 524 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SRGAP2CP0DJJ0 459 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 MAP3K7CLP57077 242 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 KLC4Q9NSK0 619 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 ZNF804BA4D1E1 1349 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 LDHAP00338 332 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 CYP21A2P08686 494 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 PLA2G4BP0C869 781 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 DDX5P17844 614 aaKnown RBP8.18□□□□□ -1.1
SF3B3-201ENST00000302516 IFNA8P32881 189 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 OR9Q1Q8NGQ5 310 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 GINS2Q9Y248 185 aa8.18□□□□□ -1.1
SF3B3-201ENST00000302516 SLCO1A2P46721 670 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TBC1D9BQ66K14 1250 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 ANLNQ9NQW6 1124 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PLA2R1Q13018 1463 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 A0A1B0GW55 424 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SPDYE16A6NNV3 312 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 WDR64B1ANS9 1081 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 HNRNPRO43390 633 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 KRT16P08779 473 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DUX4L2P0CJ85 424 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DUX4L3P0CJ86 424 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DUX4L4P0CJ87 422 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DUX4L5P0CJ88 424 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DUX4L6P0CJ89 424 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DUX4L7P0CJ90 424 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PHKG2P15735 406 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 CIITAP33076 1130 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PAPOLAP51003 745 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PMS2P54278 862 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SPDYE2Q495Y8 402 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 ALKBH5Q6P6C2 394 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 LRRC47Q8N1G4 583 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TBCKQ8TEA7 893 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DUX4Q9UBX2 424 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PSMA2P25787 234 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 OCRLQ01968 901 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 CHRNDQ07001 517 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 ARMCX2Q7L311 632 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SAMSN1Q9NSI8 373 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 KIF17Q9P2E2 1029 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SNX5Q9Y5X3 404 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 CASZ1Q86V15 1759 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 ARAP3Q8WWN8 1544 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms