RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 UTP14CQ5TAP6 766 aaKnown RBP24.58■■□□□ 1.53
SMAD1-201ENST00000302085 TOGARAM2Q6ZUX3 1019 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 REXO1L1PQ8IX06 675 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 SMAP1Q8IYB5 467 aaPredicted RBP24.58■■□□□ 1.53
SMAD1-201ENST00000302085 FAM133AQ8N9E0 248 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 NUP58Q9BVL2 599 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 TTYH3Q9C0H2 523 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 JPH1Q9HDC5 661 aaPredicted RBP24.58■■□□□ 1.53
SMAD1-201ENST00000302085 ANKEF1Q9NU02 776 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 BACH1O14867 736 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 NR2F2P24468 414 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 RAD9BQ6WBX8 426 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 MAEAQ7L5Y9 396 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 GABBR1Q9UBS5 961 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 SLC9A2Q9UBY0 812 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 SIK3Q9Y2K2 1263 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 PPP2R2CQ9Y2T4 447 aa24.58■■□□□ 1.52
SMAD1-201ENST00000302085 UNCXA6NJT0 531 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 TGFB1I1O43294 461 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 STBD1O95210 358 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 EDNRBP24530 442 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 TRMT1LQ7Z2T5 733 aaKnown RBP24.57■■□□□ 1.52
SMAD1-201ENST00000302085 KSR1Q8IVT5 923 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 TRIM59Q8IWR1 403 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 FAM178BQ8IXR5 827 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 RETREG2Q8NC44 543 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 IKZF4Q9H2S9 585 aa24.57■■□□□ 1.52
SMAD1-201ENST00000302085 LUC7L2Q9Y383 392 aaKnown RBP24.57■■□□□ 1.52
SMAD1-201ENST00000302085 SORBS3O60504 671 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 NPEPPSP55786 919 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 ACTR2P61160 394 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 ANO5Q75V66 913 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 PCMTD1Q96MG8 357 aaPredicted RBP24.56■■□□□ 1.52
SMAD1-201ENST00000302085 STRA6Q9BX79 667 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 ZMYM2Q9UBW7 1377 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 CCP110O43303 1012 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 ZNF862O60290 1169 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 USO1O60763 962 aaKnown RBP24.56■■□□□ 1.52
SMAD1-201ENST00000302085 PSAPP07602 524 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 XKR9Q5GH70 373 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 PLA2G4FQ68DD2 849 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 SWSAP1Q6NVH7 229 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 ABHD15Q6UXT9 468 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 SEPT14Q6ZU15 432 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.56■■□□□ 1.52
SMAD1-201ENST00000302085 OR8K1Q8NGG5 319 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 DNAJC7Q99615 494 aa24.56■■□□□ 1.52
SMAD1-201ENST00000302085 DOCK5Q9H7D0 1870 aa24.55■■□□□ 1.52
SMAD1-201ENST00000302085 NR3C1P04150 777 aa24.55■■□□□ 1.52
SMAD1-201ENST00000302085 ERVK-24P63145 666 aa24.55■■□□□ 1.52
SMAD1-201ENST00000302085 SP4Q02446 784 aa24.55■■□□□ 1.52
SMAD1-201ENST00000302085 RRAGCQ9HB90 399 aa24.55■■□□□ 1.52
SMAD1-201ENST00000302085 AGPAT5Q9NUQ2 364 aa24.55■■□□□ 1.52
SMAD1-201ENST00000302085 ZSCAN12O43309 604 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 TRIM21P19474 475 aaKnown RBP24.54■■□□□ 1.52
SMAD1-201ENST00000302085 COPB2P35606 906 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 FIGNQ5HY92 759 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 TMTC1Q8IUR5 882 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 CCDC155Q8N6L0 562 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 UBE4BO95155 1302 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 CLIC2O15247 247 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 PPP1R37O75864 691 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 PGK2P07205 417 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 TERF1P54274 439 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 CCDC43Q96MW1 224 aaKnown RBP24.54■■□□□ 1.52
SMAD1-201ENST00000302085 DESI2Q9BSY9 194 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 PCDHB13Q9Y5F0 798 aa24.54■■□□□ 1.52
SMAD1-201ENST00000302085 MYH11P35749 1972 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 CYP2C8P10632 490 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 RPL13P26373 211 aaKnown RBP24.53■■□□□ 1.52
SMAD1-201ENST00000302085 STXBP4Q6ZWJ1 553 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 CYFIP1Q7L576 1253 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 FRMD5Q7Z6J6 570 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 CCDC60Q8IWA6 550 aaPredicted RBP24.53■■□□□ 1.52
SMAD1-201ENST00000302085 ATP6V0A1Q93050 837 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 MS4A4AQ96JQ5 239 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 FGD4Q96M96 766 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.53■■□□□ 1.52
SMAD1-201ENST00000302085 WDR81Q562E7 1941 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 PLS3P13797 630 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 ZBED6P86452 979 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 KCNMA1Q12791 1236 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 CYP26C1Q6V0L0 522 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 SMCR8Q8TEV9 937 aaPredicted RBP24.53■■□□□ 1.52
SMAD1-201ENST00000302085 PRIMPOLQ96LW4 560 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 TIPINQ9BVW5 301 aa24.53■■□□□ 1.52
SMAD1-201ENST00000302085 LARSQ9P2J5 1176 aaKnown RBP24.53■■□□□ 1.52
SMAD1-201ENST00000302085 A0A1W2PQJ5 194 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 SOCS7O14512 581 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 EPHB6O15197 1021 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 AKAP3O75969 853 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 MAPTP10636 758 aaKnown RBP24.52■■□□□ 1.52
SMAD1-201ENST00000302085 NFIL3Q16649 462 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 MIS18BP1Q6P0N0 1132 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 WDR59Q6PJI9 974 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 OTUD6AQ7L8S5 288 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 CHP1Q99653 195 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 GPRC5CQ9NQ84 441 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 FAM184BQ9ULE4 1060 aa24.52■■□□□ 1.52
SMAD1-201ENST00000302085 ADGRG1Q9Y653 693 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms