RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 NRBP2Q9NSY0 501 aa13.77□□□□□ -0.2
CLPX-201ENST00000300107 FAM187AA6NFU0 413 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 NCF2P19878 526 aaPredicted RBP13.77□□□□□ -0.21
CLPX-201ENST00000300107 CNGA1P29973 690 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 MDH1P40925 334 aaKnown RBP13.77□□□□□ -0.21
CLPX-201ENST00000300107 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 SPICE1Q8N0Z3 855 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLPX-201ENST00000300107 TTC17Q96AE7 1141 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 CCT8L2Q96SF2 557 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.21
CLPX-201ENST00000300107 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLPX-201ENST00000300107 XDHP47989 1333 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 CHGBP05060 677 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 PDHA1P08559 390 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 GPC5P78333 572 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 EXOSC10Q01780 885 aaKnown RBP13.77□□□□□ -0.21
CLPX-201ENST00000300107 TNFAIP1Q13829 316 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 TRAIPQ9BWF2 469 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 EPN3Q9H201 632 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 TLK1Q9UKI8 766 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 CSADQ9Y600 493 aa13.77□□□□□ -0.21
CLPX-201ENST00000300107 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 APOEP02649 317 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 CHRNA3P32297 505 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ALX1Q15699 326 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 TRIML2Q8N7C3 387 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 KCNV2Q8TDN2 545 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 TMPRSS15P98073 1019 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ART3Q13508 389 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 TC2NQ8N9U0 490 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ZFP69BQ9UJL9 534 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ANAPC7Q9UJX3 599 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 MED14O60244 1454 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 POTEMA6NI47 508 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 CFLARO15519 480 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 TMED1Q13445 227 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ALCAMQ13740 583 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 TXNRD1Q16881 649 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 SH2D3CQ8N5H7 860 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 MCUQ8NE86 351 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 CNOT8Q9UFF9 292 aaKnown RBP13.76□□□□□ -0.21
CLPX-201ENST00000300107 SCINQ9Y6U3 715 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 HAUS5O94927 633 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 DEUP1Q05D60 604 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ZNF211Q13398 564 aaPredicted RBP13.76□□□□□ -0.21
CLPX-201ENST00000300107 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
CLPX-201ENST00000300107 DNAAF3Q8N9W5 541 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
CLPX-201ENST00000300107 CCDC138Q96M89 665 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 NACA2Q9H009 215 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 ADD3Q9UEY8 706 aaKnown RBP13.76□□□□□ -0.21
CLPX-201ENST00000300107 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
CLPX-201ENST00000300107 CYP27B1O15528 508 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 FXR1P51114 621 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLPX-201ENST00000300107 STAG2Q8N3U4 1231 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 KCTD6Q8NC69 237 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 HIPK4Q8NE63 616 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 SNAP23O00161 211 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 COPEO14579 308 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 TJP3O95049 919 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 NR3C1P04150 777 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 ARL4CP56559 192 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 MECOMQ03112 1051 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.215e-7■□□□□ 9.8
CLPX-201ENST00000300107 BYSLQ13895 437 aaKnown RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 RAD9BQ6WBX8 426 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 RNF207Q6ZRF8 634 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 CALR3Q96L12 384 aaKnown RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 CEP170P1Q96L14 293 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 ANO3Q9BYT9 981 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 L2HGDHQ9H9P8 463 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 G3BP2Q9UN86 482 aaKnown RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 NOC2LQ9Y3T9 749 aaKnown RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 ERVV-1B6SEH8 477 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 WDR46O15213 610 aaKnown RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 MDM2Q00987 491 aaPredicted RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 KCNB1Q14721 858 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 NR1I3Q14994 352 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 CCNYQ8ND76 341 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 TGS1Q96RS0 853 aaKnown RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 MRPL46Q9H2W6 279 aaKnown RBP13.75□□□□□ -0.21
CLPX-201ENST00000300107 ECT2Q9H8V3 914 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 BCORL1Q5H9F3 1711 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 BMP3P12645 472 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 IRAK1P51617 712 aa13.75□□□□□ -0.21
CLPX-201ENST00000300107 ZNF473Q8WTR7 871 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms