RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 LRRC15Q8TF66 581 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 FAM117AQ9C073 453 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 GLT8D2Q9H1C3 349 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 UNC45AQ9H3U1 944 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 EHMT1Q9H9B1 1298 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 JADE2Q9NQC1 790 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 ADD3Q9UEY8 706 aaKnown RBP7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 FBXO2Q9UK22 296 aaPredicted RBP7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 PTPN22Q9Y2R2 807 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 SYNGAP1Q96PV0 1343 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 TMEM150BA6NC51 233 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 VWA3AA6NCI4 1184 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 ASB14A6NK59 587 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 MEIS1O00470 390 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 STRNO43815 780 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 GADD45BO75293 160 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 GGPS1O95749 300 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 HMGCRP04035 888 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 ZNF286BP0CG31 522 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 CNGA1P29973 690 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 CDC25AP30304 524 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 GRK4P32298 578 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 TXKP42681 527 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 NASPP49321 788 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 ATP2C1P98194 919 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 BEX3Q00994 111 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 ARHGAP1Q07960 439 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 MTMR1Q13613 665 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 ACVR2BQ13705 512 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 STXBP2Q15833 593 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 UGCGQ16739 394 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 CCDC144BQ3MJ40 725 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 MFSD14CQ5VZR4 134 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 NCAPH2Q6IBW4 605 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 CYFIP1Q7L576 1253 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 DNERQ8NFT8 737 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 LEO1Q8WVC0 666 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 SLC5A5Q92911 643 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 PLIN2Q99541 437 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 ZNF577Q9BSK1 485 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 GOLPH3LQ9H4A5 285 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 VTA1Q9NP79 307 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 KCNMB3Q9NPA1 279 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 KCNH7Q9NS40 1196 aa7.33□□□□□ -1.24
DEPDC4-201ENST00000299185 CYP3A7-CYP3A51PA0A087WV96 503 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 A0A087X0B3 334 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 SPATA31C2B4DYI2 1134 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 DHX15O43143 795 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 FARP2O94887 1054 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 PGK1P00558 417 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 ADH1AP07327 375 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 TXNP10599 105 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 CYP3A7P24462 503 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 PTGIRP43119 386 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 KRT85P78386 507 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 CYP4A11Q02928 519 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 SPIRE1Q08AE8 756 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 IRF5Q13568 498 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 ZRSR1Q15695 479 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 Q4G0T1 1027 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 RILPL1Q5EBL4 403 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 UTP14CQ5TAP6 766 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 MAP3K21Q5TCX8 1036 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 LRCH2Q5VUJ6 765 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 CCDC62Q6P9F0 684 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 TRMT1LQ7Z2T5 733 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 TLK2Q86UE8 772 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 NLRX1Q86UT6 975 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 LINC00301Q8NCQ3 95 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 BANK1Q8NDB2 785 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 SLC17A8Q8NDX2 589 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 OR6J1Q8NGC5 347 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 AFG1LQ8WV93 481 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 GPRASP2Q96D09 838 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 ZBTB10Q96DT7 871 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 ZNF396Q96N95 335 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 MTMR9Q96QG7 549 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 CSRNP2Q9H175 543 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 ZSCAN16Q9H4T2 348 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 TMPRSS4Q9NRS4 437 aa7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 WRAP73Q9P2S5 460 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 DDX41Q9UJV9 622 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 DIS3Q9Y2L1 958 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-201ENST00000299185 SYNRGQ9UMZ2 1314 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 IPO5O00410 1097 aaKnown RBP7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 SPTLC2O15270 562 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 CTAGE5O15320 804 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 MARCH6O60337 910 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 GAS7O60861 476 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 EIF3JO75822 258 aaKnown RBP7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 PSMD10O75832 226 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 XRCC5P13010 732 aaKnown RBP7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 GCFC2P16383 781 aaKnown RBP7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 MARK3P27448 753 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 HOXD10P28358 340 aa7.31□□□□□ -1.24
DEPDC4-201ENST00000299185 ICAM3P32942 547 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms