RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PAK2Q13177 524 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 PDIA5Q14554 519 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 NAA25Q14CX7 972 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 HERC4Q5GLZ8 1057 aaPredicted RBP17.03■□□□□ 0.32
UBAP1-201ENST00000297661 PPP4R3AQ6IN85 833 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 CCDC84Q86UT8 332 aaPredicted RBP17.03■□□□□ 0.32
UBAP1-201ENST00000297661 SLF2Q8IX21 1173 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 BCAS3Q9H6U6 928 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 EPB41L5Q9HCM4 733 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 GDF3Q9NR23 364 aa17.03■□□□□ 0.32
UBAP1-201ENST00000297661 RPSAP08865 295 aaKnown RBP17.02■□□□□ 0.32
UBAP1-201ENST00000297661 SNHG28P0DPA3 235 aa17.02■□□□□ 0.32
UBAP1-201ENST00000297661 GUCY2DQ02846 1103 aa17.02■□□□□ 0.32
UBAP1-201ENST00000297661 GLE1Q53GS7 698 aaKnown RBP17.02■□□□□ 0.32
UBAP1-201ENST00000297661 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.32
UBAP1-201ENST00000297661 HGSNATQ68CP4 663 aa17.02■□□□□ 0.32
UBAP1-201ENST00000297661 DBNDD1Q9H9R9 158 aa17.02■□□□□ 0.32
UBAP1-201ENST00000297661 KCNQ5Q9NR82 932 aa17.02■□□□□ 0.32
UBAP1-201ENST00000297661 COL4A3BPQ9Y5P4 624 aa17.02■□□□□ 0.32
UBAP1-201ENST00000297661 POTEFA5A3E0 1075 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 KIF3CO14782 793 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 NOL4O94818 638 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 FTCDO95954 541 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 POTEIP0CG38 1075 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 CALRP27797 417 aaKnown RBP17.02■□□□□ 0.31
UBAP1-201ENST00000297661 SLC8A1P32418 973 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 GBP2P32456 591 aaPredicted RBP17.02■□□□□ 0.31
UBAP1-201ENST00000297661 POTEGQ6S5H5 508 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 MAATS1Q7Z4T9 603 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 GPBP1Q86WP2 473 aa17.02■□□□□ 0.31
UBAP1-201ENST00000297661 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.02■□□□□ 0.31
UBAP1-201ENST00000297661 IGKV6D-41A0A0C4DH26 115 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 OPLAHO14841 1288 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 PPP1R12BO60237 982 aaPredicted RBP17.01■□□□□ 0.31
UBAP1-201ENST00000297661 HEXIM1O94992 359 aaKnown RBP17.01■□□□□ 0.31
UBAP1-201ENST00000297661 MREGQ8N565 214 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 ALS2CR12Q96Q35 445 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 GMNCA6NCL1 334 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 FGFR1OPO95684 399 aaKnown RBP17.01■□□□□ 0.31
UBAP1-201ENST00000297661 KRT18P05783 430 aaKnown RBP17.01■□□□□ 0.31
UBAP1-201ENST00000297661 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
UBAP1-201ENST00000297661 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
UBAP1-201ENST00000297661 RAPGEF1Q13905 1077 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 FAM83BQ5T0W9 1011 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 PACSIN1Q9BY11 444 aa17.01■□□□□ 0.31
UBAP1-201ENST00000297661 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 ZBTB5O15062 677 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 ATP2C2O75185 946 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 ACTN1P12814 892 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 SCTRP47872 440 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 CASP5P51878 434 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 IRX1P78414 480 aaPredicted RBP17■□□□□ 0.31
UBAP1-201ENST00000297661 QPCTQ16769 361 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 ZCWPW2Q504Y3 356 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 SLC30A10Q6XR72 485 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 C1orf131Q8NDD1 294 aaKnown RBP17■□□□□ 0.31
UBAP1-201ENST00000297661 TLR10Q9BXR5 811 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 MED24O75448 989 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 SKAP2O75563 359 aaPredicted RBP17■□□□□ 0.31
UBAP1-201ENST00000297661 PSMC6P62333 389 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 QRICH1Q2TAL8 776 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 ASTE1Q2TB18 679 aaPredicted RBP17■□□□□ 0.31
UBAP1-201ENST00000297661 C11orf91Q3C1V1 193 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 CDC42EP5Q6NZY7 148 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 ARFGAP2Q8N6H7 521 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 SCFD1Q8WVM8 642 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 TBC1D5Q92609 795 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 P2RX7Q99572 595 aaKnown RBP17■□□□□ 0.31
UBAP1-201ENST00000297661 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 PLAAQ9Y263 795 aa17■□□□□ 0.31
UBAP1-201ENST00000297661 KLHDC7AQ5VTJ3 777 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 GOLPH3Q9H4A6 298 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 PCDHA1Q9Y5I3 950 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBAP1-201ENST00000297661 hCG_1984214I3L0E3 225 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 PALMO75781 387 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 CCNHP51946 323 aaPredicted RBP16.99■□□□□ 0.31
UBAP1-201ENST00000297661 IFFO1Q0D2I5 559 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 ORC2Q13416 577 aaPredicted RBP16.99■□□□□ 0.31
UBAP1-201ENST00000297661 XRCC4Q13426 336 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 USH1GQ495M9 461 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 SFMBT2Q5VUG0 894 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 ZNF713Q8N859 430 aaPredicted RBP16.99■□□□□ 0.31
UBAP1-201ENST00000297661 SEC16BQ96JE7 1060 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 ADAMTS1Q9UHI8 967 aa16.99■□□□□ 0.31
UBAP1-201ENST00000297661 GOLGA6L10A6NI86 522 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 BACH1O14867 736 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 CLSTN1O94985 981 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 LCA5LO95447 670 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 CFAP221Q4G0U5 840 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 PRR16Q569H4 304 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 CASKIN2Q8WXE0 1202 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 TMBIM4Q9HC24 238 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
UBAP1-201ENST00000297661 A0A087X0T9 212 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms