RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 SLITRK3O94933 977 aa14.99□□□□□ -0.01
VPS28-201ENST00000292510 CHRNA1P02708 482 aa14.99□□□□□ -0.01
VPS28-201ENST00000292510 TARBP2Q15633 366 aaKnown RBP14.99□□□□□ -0.01
VPS28-201ENST00000292510 FAM173BQ6P4H8 233 aa14.99□□□□□ -0.01
VPS28-201ENST00000292510 ANO5Q75V66 913 aa14.99□□□□□ -0.01
VPS28-201ENST00000292510 BRAPQ7Z569 592 aa14.99□□□□□ -0.01
VPS28-201ENST00000292510 RPAINQ86UA6 219 aa14.99□□□□□ -0.01
VPS28-201ENST00000292510 CXXC1Q9P0U4 656 aaPredicted RBP14.99□□□□□ -0.01
VPS28-201ENST00000292510 CEP131Q9UPN4 1083 aa14.99□□□□□ -0.01
VPS28-201ENST00000292510 A0A087WWV3 80 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 CAND2O75155 1236 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 CXCL10P02778 98 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 NPEPPSP55786 919 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 MRPS6P82932 125 aaKnown RBP14.98□□□□□ -0.01
VPS28-201ENST00000292510 MGAT3Q09327 533 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 IL17AQ16552 155 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 FAM26DQ5JW98 314 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 RSPH3Q86UC2 560 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 KIAA0319LQ8IZA0 1049 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 LRRC71Q8N4P6 559 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 METTL13Q8N6R0 699 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
VPS28-201ENST00000292510 CEP89Q96ST8 783 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 PPP1R16BQ96T49 567 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 HSD17B14Q9BPX1 270 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 NIFKQ9BYG3 293 aaKnown RBP14.98□□□□□ -0.01
VPS28-201ENST00000292510 ZSWIM4Q9H7M6 989 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 CDY2AQ9Y6F7 541 aa14.98□□□□□ -0.01
VPS28-201ENST00000292510 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 MED24O75448 989 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 PFKMP08237 780 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 GHRP10912 638 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 YWHABP31946 246 aaKnown RBP14.97□□□□□ -0.01
VPS28-201ENST00000292510 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS28-201ENST00000292510 CLCN3P51790 818 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 ATP2C1P98194 919 aaPredicted RBP14.97□□□□□ -0.01
VPS28-201ENST00000292510 TMEM266Q2M3C6 531 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 RASIP1Q5U651 963 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 FOXD4L5Q5VV16 416 aaPredicted RBP14.97□□□□□ -0.01
VPS28-201ENST00000292510 FAM109BQ6ICB4 259 aaPredicted RBP14.97□□□□□ -0.01
VPS28-201ENST00000292510 EFCAB12Q6NXP0 572 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 C4orf19Q8IY42 314 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 FOXD4L4Q8WXT5 416 aaPredicted RBP14.97□□□□□ -0.01
VPS28-201ENST00000292510 HERVK_113Q902F9 699 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 LRCH3Q96II8 777 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 SUGCTQ9HAC7 445 aa14.97□□□□□ -0.01
VPS28-201ENST00000292510 PP2D1A8MPX8 630 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 MAGEB2O15479 319 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 DKC1O60832 514 aaKnown RBP eCLIP14.96□□□□□ -0.01
VPS28-201ENST00000292510 PARNO95453 639 aaKnown RBP14.96□□□□□ -0.01
VPS28-201ENST00000292510 VTNP04004 478 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 SPATA31C1P0DKV0 1188 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 FXR1P51114 621 aaKnown RBP eCLIP14.96□□□□□ -0.01
VPS28-201ENST00000292510 TBC1D8BQ0IIM8 1120 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 LRIT3Q3SXY7 679 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 CATSPER3Q86XQ3 398 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 DBF4BQ8NFT6 615 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 NEK9Q8TD19 979 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 PIGOQ8TEQ8 1089 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 CEP170P1Q96L14 293 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 CYP26B1Q9NR63 512 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
VPS28-201ENST00000292510 GINS2Q9Y248 185 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 TRPV2Q9Y5S1 764 aa14.96□□□□□ -0.01
VPS28-201ENST00000292510 GRXCR1A8MXD5 290 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 LAD1O00515 517 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 CDC25AP30304 524 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 PRPHP41219 470 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
VPS28-201ENST00000292510 DRP2Q13474 957 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 PKP1Q13835 747 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 LPIN1Q14693 890 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 SF3A1Q15459 793 aaKnown RBP14.95□□□□□ -0.02
VPS28-201ENST00000292510 KIZQ2M2Z5 673 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 PLEKHG4Q58EX7 1191 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 XKR9Q5GH70 373 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 IER5Q5VY09 327 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 CNKSR3Q6P9H4 555 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 DTHD1Q6ZMT9 781 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 NME8Q8N427 588 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 IGSF22Q8N9C0 903 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 ZNF668Q96K58 619 aaPredicted RBP14.95□□□□□ -0.02
VPS28-201ENST00000292510 CELF4Q9BZC1 486 aaKnown RBP14.95□□□□□ -0.02
VPS28-201ENST00000292510 CDHR5Q9HBB8 845 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 LRWD1Q9UFC0 647 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 AKT3Q9Y243 479 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 CLIC4Q9Y696 253 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 EVPLQ92817 2033 aa14.95□□□□□ -0.02
VPS28-201ENST00000292510 SIP14410 1827 aa14.94□□□□□ -0.02
VPS28-201ENST00000292510 VWA3AA6NCI4 1184 aa14.94□□□□□ -0.02
VPS28-201ENST00000292510 M0QZ92 97 aa14.94□□□□□ -0.02
VPS28-201ENST00000292510 MAFO75444 373 aaPredicted RBP14.94□□□□□ -0.02
VPS28-201ENST00000292510 LYPLA2O95372 231 aa14.94□□□□□ -0.02
VPS28-201ENST00000292510 ACTN1P12814 892 aa14.94□□□□□ -0.02
VPS28-201ENST00000292510 CCT6AP40227 531 aaKnown RBP14.94□□□□□ -0.02
VPS28-201ENST00000292510 CEBPZQ03701 1054 aaKnown RBP14.94□□□□□ -0.02
VPS28-201ENST00000292510 ECM1Q16610 540 aa14.94□□□□□ -0.02
VPS28-201ENST00000292510 FBXO47Q5MNV8 452 aa14.94□□□□□ -0.02
VPS28-201ENST00000292510 POTEGQ6S5H5 508 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms