RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 ITGB3BPQ13352 177 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 HLTFQ14527 1009 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 OTOP1Q7RTM1 612 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 MTMR9Q96QG7 549 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 LSM14BQ9BX40 385 aaKnown RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 DNAH12Q6ZR08 3092 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 ZNF536O15090 1300 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 LTBP3Q9NS15 1303 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 DENND3A2RUS2 1198 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 SLITRK3O94933 977 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 STAT5BP51692 787 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 UGCGQ16739 394 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 LRRC15Q8TF66 581 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 TUBE1Q9UJT0 475 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 MYH6P13533 1939 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 SLU7O95391 586 aaKnown RBP9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 CTSHP09668 335 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 KRT5P13647 590 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 CCNE1P24864 410 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 RPA1P27694 616 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 CASP4P49662 377 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 GTF2A2P52657 109 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 CYP27A1Q02318 531 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 KIF5AQ12840 1032 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 PDIA5Q14554 519 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 TRIML1Q8N9V2 468 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 TBC1D22BQ9NU19 505 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 CWC15Q9P013 229 aaKnown RBP9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 TFR2Q9UP52 801 aa9.9□□□□□ -0.82
CCDC144B-201ENST00000285176 CCDC66A2RUB6 948 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 SOWAHDA6NJG2 315 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 TBC1D8O95759 1140 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 PNMA6AP0CW24 399 aaPredicted RBP9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 NEFHP12036 1026 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 RPL13P26373 211 aaKnown RBP9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 MTF1Q14872 753 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 RINT1Q6NUQ1 792 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 ENOX1Q8TC92 643 aaKnown RBP9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 CLEC4DQ8WXI8 215 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 TSPYL1Q9H0U9 437 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 AGTPBP1Q9UPW5 1226 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 PPP2R3BQ9Y5P8 575 aa9.9□□□□□ -0.83
CCDC144B-201ENST00000285176 SPDYE5A6NIY4 337 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 DNAAF5Q86Y56 855 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 PPM1KQ8N3J5 372 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 GCLMP48507 274 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 CLCN3P51790 818 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 PSMC5P62195 406 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 FKBP3Q00688 224 aaKnown RBP9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 MAP9Q49MG5 647 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 TCP11X2Q5H9J9 407 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 BTNL9Q6UXG8 535 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 CCDC60Q8IWA6 550 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 LRRC8AQ8IWT6 810 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 KIAA0895Q8NCT3 520 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 CTNNBL1Q8WYA6 563 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 TRIM6Q9C030 488 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 TMEM110-MUSTN1A8MSY1 372 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 GJC1P36383 396 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 ACOT2P49753 483 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 BEX3Q00994 111 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 KRT76Q01546 638 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 EPHA7Q15375 998 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 E2F4Q16254 413 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 HSDL1Q3SXM5 330 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 CNGA4Q8IV77 575 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 RNF149Q8NC42 400 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 AFG1LQ8WV93 481 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 BRI3BPQ8WY22 251 aa9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 PARK7Q99497 189 aaKnown RBP9.89□□□□□ -0.83
CCDC144B-201ENST00000285176 USP27XA6NNY8 438 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 CALUO43852 315 aaPredicted RBP9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 ERCC5P28715 1186 aaPredicted RBP9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 ALDH5A1P51649 535 aaPredicted RBP9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 TERF1P54274 439 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 TTLL4Q14679 1199 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 ZNF394Q53GI3 561 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 POLR3FQ9H1D9 316 aaPredicted RBP9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 AGO4Q9HCK5 861 aaKnown RBP9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 SPTLC3Q9NUV7 552 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 COL24A1Q17RW2 1714 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 PLIN4Q96Q06 1357 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 K7ERI5 159 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 KRT86O43790 486 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 AOC2O75106 756 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 YY1P25490 414 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 CHADLQ6NUI6 762 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 FAM186BQ8IYM0 893 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 EHBP1Q8NDI1 1231 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 ZBED3Q96IU2 234 aaPredicted RBP9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 CDHR1Q96JP9 859 aa9.88□□□□□ -0.83
CCDC144B-201ENST00000285176 CAPZA3Q96KX2 299 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms