RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 EDNRBP24530 442 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 STXBP2Q15833 593 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 TSC1Q92574 1164 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 GPRASP2Q96D09 838 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 CAPNS2Q96L46 248 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 NAA15Q9BXJ9 866 aaKnown RBP23.16■■□□□ 1.3
YBX3-202ENST00000279550 ZFYVE28Q9HCC9 887 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 IVNS1ABPQ9Y6Y0 642 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 ZSCAN12O43309 604 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 RGS20O76081 388 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 FGFR1OPO95684 399 aaKnown RBP23.16■■□□□ 1.3
YBX3-202ENST00000279550 MAPK4P31152 587 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 GTF2F1P35269 517 aaKnown RBP eCLIP23.16■■□□□ 1.3
YBX3-202ENST00000279550 KRT9P35527 623 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 EPM2AIP1Q7L775 607 aaPredicted RBP23.16■■□□□ 1.3
YBX3-202ENST00000279550 KCTD17Q8N5Z5 321 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 FGD4Q96M96 766 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 TTYH3Q9C0H2 523 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 PAXBP1Q9Y5B6 917 aa23.16■■□□□ 1.3
YBX3-202ENST00000279550 KIF2AO00139 706 aaPredicted RBP23.15■■□□□ 1.3
YBX3-202ENST00000279550 MAFGO15525 162 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 MYBP10242 640 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 HOXD13P35453 343 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 CRHR2Q13324 411 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 VWA3BQ502W6 1294 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 TRIM65Q6PJ69 517 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 C17orf99Q6UX52 265 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 SYT10Q6XYQ8 523 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 C1orf186Q6ZWK4 172 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 GPR142Q7Z601 462 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 NLRX1Q86UT6 975 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 BANK1Q8NDB2 785 aa23.15■■□□□ 1.3
YBX3-202ENST00000279550 EIF3JO75822 258 aaKnown RBP23.14■■□□□ 1.3
YBX3-202ENST00000279550 ADORA2AP29274 412 aa23.14■■□□□ 1.3
YBX3-202ENST00000279550 MAN2A1Q16706 1144 aa23.14■■□□□ 1.3
YBX3-202ENST00000279550 ERGIC2Q96RQ1 377 aa23.14■■□□□ 1.3
YBX3-202ENST00000279550 MRPL44Q9H9J2 332 aaKnown RBP23.14■■□□□ 1.3
YBX3-202ENST00000279550 CAPN11Q9UMQ6 739 aa23.14■■□□□ 1.3
YBX3-202ENST00000279550 AOC2O75106 756 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 MUTP22033 750 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 GNPTABQ3T906 1256 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 MIER3Q7Z3K6 550 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 ZC3H3Q8IXZ2 948 aaKnown RBP23.13■■□□□ 1.29
YBX3-202ENST00000279550 MPHOSPH6Q99547 160 aaKnown RBP23.13■■□□□ 1.29
YBX3-202ENST00000279550 LXNQ9BS40 222 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 NDST4Q9H3R1 872 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 ADGRG1Q9Y653 693 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 A0A0U1RQJ8 604 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 CA12O43570 354 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 TBCAO75347 108 aaKnown RBP23.13■■□□□ 1.29
YBX3-202ENST00000279550 FKBP3Q00688 224 aaKnown RBP23.13■■□□□ 1.29
YBX3-202ENST00000279550 ATRIPQ8WXE1 791 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 CDHR1Q96JP9 859 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 NACC1Q96RE7 527 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 DNAJC7Q99615 494 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 TBC1D22BQ9NU19 505 aa23.13■■□□□ 1.29
YBX3-202ENST00000279550 PLXNB2O15031 1838 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 SFI1A8K8P3 1242 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 FANCGO15287 622 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 PRPF6O94906 941 aaKnown RBP23.12■■□□□ 1.29
YBX3-202ENST00000279550 GRB14Q14449 540 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 FKBP15Q5T1M5 1219 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 PLEKHH3Q7Z736 793 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 TMTC1Q8IUR5 882 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 KIF18AQ8NI77 898 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 CEP63Q96MT8 703 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 SIK3Q9Y2K2 1263 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 LUC7L2Q9Y383 392 aaKnown RBP23.12■■□□□ 1.29
YBX3-202ENST00000279550 COL4A3BPQ9Y5P4 624 aa23.12■■□□□ 1.29
YBX3-202ENST00000279550 LOC102724159A0A0B4J2E5 919 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 DYNC1I1O14576 645 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 ATP9AO75110 1047 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 ETF1P62495 437 aaKnown RBP23.11■■□□□ 1.29
YBX3-202ENST00000279550 PWP2Q15269 919 aaKnown RBP23.11■■□□□ 1.29
YBX3-202ENST00000279550 ZNF792Q3KQV3 632 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 KIF20AO95235 890 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 GAP43P17677 238 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 OR8K1Q8NGG5 319 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 PCMTD1Q96MG8 357 aaPredicted RBP23.11■■□□□ 1.29
YBX3-202ENST00000279550 CHP1Q99653 195 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 AGPAT5Q9NUQ2 364 aa23.11■■□□□ 1.29
YBX3-202ENST00000279550 ZNFX1Q9P2E3 1918 aaKnown RBP23.1■■□□□ 1.29
YBX3-202ENST00000279550 SPATA31C2B4DYI2 1134 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 FAM13AO94988 1023 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 BMT2Q1RMZ1 405 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 CCDC40Q4G0X9 1142 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 WDR59Q6PJI9 974 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 CYP26C1Q6V0L0 522 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 REM2Q8IYK8 340 aaPredicted RBP23.1■■□□□ 1.29
YBX3-202ENST00000279550 ACRBPQ8NEB7 543 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 NEK9Q8TD19 979 aa23.1■■□□□ 1.29
YBX3-202ENST00000279550 LRRC37A2A6NM11 1700 aa23.09■■□□□ 1.29
YBX3-202ENST00000279550 EPHB6O15197 1021 aa23.09■■□□□ 1.29
YBX3-202ENST00000279550 CCDC175P0C221 793 aa23.09■■□□□ 1.29
YBX3-202ENST00000279550 KCNA2P16389 499 aa23.09■■□□□ 1.29
YBX3-202ENST00000279550 ICAM3P32942 547 aa23.09■■□□□ 1.29
YBX3-202ENST00000279550 KNOP1Q1ED39 458 aaKnown RBP23.09■■□□□ 1.29
YBX3-202ENST00000279550 EDRF1Q3B7T1 1238 aa23.09■■□□□ 1.29
YBX3-202ENST00000279550 CCDC155Q8N6L0 562 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms