RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 MAGOHBQ96A72 148 aaKnown RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 FAM210AQ96ND0 272 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 IFIH1Q9BYX4 1025 aaKnown RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 GDF3Q9NR23 364 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 STK17AQ9UEE5 414 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 HYOU1Q9Y4L1 999 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 AHCYL1O43865 530 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 CTNNA1P35221 906 aaKnown RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 HSD17B3P37058 310 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 SCNN1DP51172 638 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 ALDH5A1P51649 535 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 SPA17Q15506 151 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 ANKRD20A2Q5SQ80 823 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 ANKRD20A1Q5TYW2 823 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 ANKRD20A3Q5VUR7 823 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 CRELD2Q6UXH1 353 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 UNC13DQ70J99 1090 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 KIAA0895Q8NCT3 520 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 CCDC42Q96M95 316 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 MTMR9Q96QG7 549 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PURBQ96QR8 312 aaKnown RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 TSGA10Q9BZW7 698 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 LRRC27Q9C0I9 530 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 MMRN2Q9H8L6 949 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 ZFATQ9P243 1243 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PACSIN2Q9UNF0 486 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PNMA6FA0A0J9YX94 578 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PVALEFA0A1B0GWK0 134 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PPEF1O14829 653 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PDHA1P08559 390 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PYGBP11216 843 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 DRD4P21917 467 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 SLC16A2P36021 539 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 FXR2P51116 673 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PPP2R2AP63151 447 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 ZNF844Q08AG5 666 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 TTBK2Q6IQ55 1244 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 CD302Q8IX05 232 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 ADGRF4Q8IZF3 695 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 UBLCP1Q8WVY7 318 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-201ENST00000278302 PNMA5Q96PV4 448 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 UIMC1Q96RL1 719 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 CRAMP1Q96RY5 1269 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 TSG101Q99816 390 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 TANGO6Q9C0B7 1094 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 JMJD4Q9H9V9 463 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 BLOC1S4Q9NUP1 217 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 SERPINB13Q9UIV8 391 aa8.29□□□□□ -1.08
TRIM6-201ENST00000278302 TTC36A6NLP5 189 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 NKRFO15226 690 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 CTNND1O60716 968 aaKnown RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 TCP1P17987 556 aaKnown RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 PDIA5Q14554 519 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 LRRC41Q15345 812 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 UAP1Q16222 522 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 VWA3BQ502W6 1294 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 MIIPQ5JXC2 388 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 KCTD1Q719H9 257 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 CCDC170Q8IYT3 715 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 CCDC197Q8NCU1 140 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 RAD54LQ92698 747 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 MXD3Q9BW11 206 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 TLR10Q9BXR5 811 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 COA1Q9GZY4 146 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 FAM207AQ9NSI2 230 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 ABCF3Q9NUQ8 709 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 DDX25Q9UHL0 483 aaKnown RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 MYH1P12882 1939 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 DDX60LQ5H9U9 1706 aaKnown RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 NHSQ6T4R5 1651 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 C5orf60A6NFR6 353 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 A6NHS1 94 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 RASSF10A6NK89 507 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 HLA-DOAP06340 250 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 ITIH3Q06033 890 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 TAF11Q15544 211 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 MEA1Q16626 185 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 PTPROQ16827 1216 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 CENPPQ6IPU0 288 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 SP8Q8IXZ3 490 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 KLHL23Q8NBE8 558 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 DDX12PQ92771 950 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 ERGIC2Q96RQ1 377 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 MTFR1LQ9H019 292 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 TMX4Q9H1E5 349 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 RIC8AQ9NPQ8 531 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 DDX4Q9NQI0 724 aaKnown RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 BMP2KQ9NSY1 1161 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 SWAP70Q9UH65 585 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 PCDHA13Q9Y5I0 950 aa8.28□□□□□ -1.08
TRIM6-201ENST00000278302 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-201ENST00000278302 RAD51CO43502 376 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms