RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 KLRC1P26715 233 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 CD52P31358 61 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 UGCGQ16739 394 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 MOXD1Q6UVY6 613 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 B3GNT9Q6UX72 402 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 RSPH3Q86UC2 560 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 TGS1Q96RS0 853 aaKnown RBP16.31■□□□□ 0.2
HMGN3-201ENST00000275036 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
HMGN3-201ENST00000275036 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
HMGN3-201ENST00000275036 COL1A2P08123 1366 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 SMIM35A0A1B0GVV1 85 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 WDR64B1ANS9 1081 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 ENPP3O14638 875 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 CHMP2AO43633 222 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 ZNF862O60290 1169 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 LINC00271P0C7V0 271 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 XBP1P17861 261 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TFF2Q03403 129 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 NR5A1Q13285 461 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TJAP1Q5JTD0 557 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TSHZ1Q6ZSZ6 1077 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
HMGN3-201ENST00000275036 RTN4RL1Q86UN2 441 aaPredicted RBP16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TNPO1Q92973 898 aaKnown RBP16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TNFRSF25Q93038 417 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 CDHR5Q9HBB8 845 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 TRPV2Q9Y5S1 764 aa16.3■□□□□ 0.2
HMGN3-201ENST00000275036 ATG2AQ2TAZ0 1938 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 CCDC194A0A1B0GVG4 234 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
HMGN3-201ENST00000275036 C22orf31O95567 290 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 FOSBP53539 338 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 KIAA0319LQ8IZA0 1049 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 ATXN2LQ8WWM7 1075 aaKnown RBP16.29■□□□□ 0.2
HMGN3-201ENST00000275036 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
HMGN3-201ENST00000275036 WASF1Q92558 559 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 ASB2Q96Q27 587 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 YME1L1Q96TA2 773 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
HMGN3-201ENST00000275036 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
HMGN3-201ENST00000275036 TCEAL9Q9UHQ7 104 aa16.29■□□□□ 0.2
HMGN3-201ENST00000275036 BRWD1Q9NSI6 2320 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 IER5Q5VY09 327 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 KCNMB3Q9NPA1 279 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 PADI3Q9ULW8 664 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 LIMCH1Q9UPQ0 1083 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
HMGN3-201ENST00000275036 KDM3AQ9Y4C1 1321 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 RPLP2P05387 115 aaKnown RBP16.27■□□□□ 0.2
HMGN3-201ENST00000275036 SFNP31947 248 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 KRT2P35908 639 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 RBM25P49756 843 aaKnown RBP16.27■□□□□ 0.2
HMGN3-201ENST00000275036 JAK3P52333 1124 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 PRKCEQ02156 737 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 EPC2Q52LR7 807 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 FBXO22Q8NEZ5 403 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 HAS1Q92839 578 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 PPP1R16BQ96T49 567 aa16.27■□□□□ 0.2
HMGN3-201ENST00000275036 MYO7AQ13402 2215 aa16.27■□□□□ 0.19
HMGN3-201ENST00000275036 KIAA1671Q9BY89 1806 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 BTBD18B2RXH4 712 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 EML1O00423 815 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 WNT7AO00755 349 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 MGEA5O60502 916 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
HMGN3-201ENST00000275036 STBD1O95210 358 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 MMP1P03956 469 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 OATP04181 439 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 KCNQ1P51787 676 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 MRPS5P82675 430 aaKnown RBP16.26■□□□□ 0.19
HMGN3-201ENST00000275036 SKIV2LQ15477 1246 aaKnown RBP16.26■□□□□ 0.19
HMGN3-201ENST00000275036 NME8Q8N427 588 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 LINC01465Q8N7H1 131 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 RDM1Q8NG50 284 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 ZNF689Q96CS4 500 aaPredicted RBP16.26■□□□□ 0.19
HMGN3-201ENST00000275036 FAM167AQ96KS9 214 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 VAV3Q9UKW4 847 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 SQORQ9Y6N5 450 aa16.26■□□□□ 0.19
HMGN3-201ENST00000275036 ADGRA3Q8IWK6 1321 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 TMEM150BA6NC51 233 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 M0QZ92 97 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 GCFC2P16383 781 aaKnown RBP16.25■□□□□ 0.19
HMGN3-201ENST00000275036 CLCN3P51790 818 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms