RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TTBK2Q6IQ55 1244 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 CCDC63Q8NA47 563 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 ACTRT1Q8TDG2 376 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 PRCCQ92733 491 aaPredicted RBP14.05□□□□□ -0.16
COL8A1-202ENST00000273342 HAS1Q92839 578 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 ABCF3Q9NUQ8 709 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 ARMCX3Q9UH62 379 aaPredicted RBP14.05□□□□□ -0.16
COL8A1-202ENST00000273342 CCT8L1PA6NM43 557 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L15C9J2P7 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L13C9JLJ4 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L11C9JVI0 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L18D6R9N7 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L22D6RA61 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L17D6RBQ6 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L19D6RCP7 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 GALCP54803 685 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 SEMA3FQ13275 785 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 PICALMQ13492 652 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 USP17L6PQ6QN14 398 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 SLC30A10Q6XR72 485 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 MAEAQ7L5Y9 396 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 PROM2Q8N271 834 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 FBXO25Q8TCJ0 367 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 SYN2Q92777 582 aaPredicted RBP14.04□□□□□ -0.16
COL8A1-202ENST00000273342 SPZ1Q9BXG8 430 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 UPP2O95045 317 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 PON1P27169 355 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL8A1-202ENST00000273342 PSMC6P62333 389 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 DRP2Q13474 957 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 MTMR3Q13615 1198 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 COBLL1Q53SF7 1204 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 CCDC65Q8IXS2 484 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 EPS8L3Q8TE67 593 aaKnown RBP14.04□□□□□ -0.16
COL8A1-202ENST00000273342 NSMCE1Q8WV22 266 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 PTPN22Q9Y2R2 807 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 CASZ1Q86V15 1759 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 DDX3XO00571 662 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL8A1-202ENST00000273342 FLOT1O75955 427 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 KCNJ2P63252 427 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 SEMA4AQ9H3S1 761 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 INTS9Q9NV88 658 aaKnown RBP14.04□□□□□ -0.16
COL8A1-202ENST00000273342 PAPPAQ13219 1627 aa14.04□□□□□ -0.16
COL8A1-202ENST00000273342 A8MUI8 341 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 PEX19P40855 299 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 MMP14P50281 582 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 DR1Q01658 176 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 CYP4A11Q02928 519 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 PSMD2Q13200 908 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 FAM98CQ17RN3 349 aaKnown RBP14.03□□□□□ -0.16
COL8A1-202ENST00000273342 ERMARDQ5T6L9 678 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 AGBL2Q5U5Z8 902 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 DNAJC17Q9NVM6 304 aaKnown RBP14.03□□□□□ -0.16
COL8A1-202ENST00000273342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL8A1-202ENST00000273342 GCNT4Q9P109 453 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 AMFRQ9UKV5 643 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 ABCB11O95342 1321 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 RSPH10B2B2RC85 870 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
COL8A1-202ENST00000273342 AKAP3O75969 853 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 RSPH10BP0C881 870 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 XRCC5P13010 732 aaKnown RBP14.03□□□□□ -0.16
COL8A1-202ENST00000273342 GCFC2P16383 781 aaKnown RBP14.03□□□□□ -0.16
COL8A1-202ENST00000273342 RFC4P35249 363 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 TBC1D9BQ66K14 1250 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 ANKS4BQ8N8V4 417 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 SLC35G2Q8TBE7 412 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 DYDC1Q8WWB3 177 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
COL8A1-202ENST00000273342 C18orf8Q96DM3 657 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 KCTD10Q9H3F6 313 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 LRP5O75197 1615 aa14.03□□□□□ -0.16
COL8A1-202ENST00000273342 XRCC4Q13426 336 aa14.02□□□□□ -0.16
COL8A1-202ENST00000273342 ZKSCAN8Q15776 578 aaPredicted RBP14.02□□□□□ -0.16
COL8A1-202ENST00000273342 IFI16Q16666 785 aaKnown RBP14.02□□□□□ -0.16
COL8A1-202ENST00000273342 ARHGAP44Q17R89 818 aa14.02□□□□□ -0.16
COL8A1-202ENST00000273342 DENND2CQ68D51 928 aa14.02□□□□□ -0.16
COL8A1-202ENST00000273342 NBPF5PQ86XG9 351 aaPredicted RBP14.02□□□□□ -0.16
COL8A1-202ENST00000273342 FAM129AQ9BZQ8 928 aa14.02□□□□□ -0.16
COL8A1-202ENST00000273342 SAMD15Q9P1V8 674 aa14.02□□□□□ -0.16
COL8A1-202ENST00000273342 THRAP3Q9Y2W1 955 aaKnown RBP14.02□□□□□ -0.16
COL8A1-202ENST00000273342 DAAM1Q9Y4D1 1078 aa14.02□□□□□ -0.16
COL8A1-202ENST00000273342 MYH7BA7E2Y1 1941 aa14.02□□□□□ -0.16
COL8A1-202ENST00000273342 PPIP5K2O43314 1243 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 C21orf2O43822 256 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 BAG3O95817 575 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 AFPP02771 609 aaKnown RBP14.02□□□□□ -0.17
COL8A1-202ENST00000273342 CHRM1P11229 460 aaPredicted RBP14.02□□□□□ -0.17
COL8A1-202ENST00000273342 BTDP43251 543 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 PMS2P54278 862 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 TMEM119Q4V9L6 283 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 DCAF12L1Q5VU92 463 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 SFR1Q86XK3 245 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 TEX11Q8IYF3 940 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms